RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 MMP26Q9NRE1 261 aa8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 UBE2J1Q9Y385 318 aaPredicted RBP8.01□□□□□ -1.13
SNRNP40-201ENST00000263694 ITPR3Q14573 2671 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 TRAV6A0A075B6T7 132 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 A0A1W2PPE3 182 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 NAP1L6A6NFF2 107 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 ZNF729A6NN14 1252 aaPredicted RBP8□□□□□ -1.13
SNRNP40-201ENST00000263694 POM121CA8CG34 1229 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 NPIPB11E5RHQ5 1161 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 HSPA12AO43301 675 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 HEXAP06865 529 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 ZNF728P0DKX0 622 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 RAB25P57735 213 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 LOXL3P58215 753 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 ARF6P62330 175 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 BAMBIQ13145 260 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 AADACL3Q5VUY0 350 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 DHRS11Q6UWP2 260 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 CENPSQ8N2Z9 138 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 C11orf42Q8N5U0 333 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 LY6G5BQ8NDX9 201 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 WFDC11Q8NEX6 87 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 OR6F1Q8NGZ6 308 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 OR10J5Q8NHC4 309 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 MARCH1Q8TCQ1 289 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 RAB39BQ96DA2 213 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 BEX2Q9BXY8 128 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 DPAGT1Q9H3H5 408 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 BEX1Q9HBH7 125 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 RDH8Q9NYR8 311 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 ONECUT1Q9UBC0 465 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 MGAT4AQ9UM21 535 aa8□□□□□ -1.13
SNRNP40-201ENST00000263694 TRBV23-1A0A0A0MS06 115 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 IGKV1D-13A0A0B4J2D9 117 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 LOC100996750A0A140TA64 210 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 VGLL3A8MV65 326 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 F2RL2O00254 374 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 GPR37O15354 613 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 TCRBP04435 133 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 IGKV1-13P0DP09 117 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 SLC25A16P16260 332 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 PI3P19957 117 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 USF1P22415 310 aaPredicted RBP7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 PAX2Q02962 417 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 OXA1LQ15070 435 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 TRIM16LQ309B1 348 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 TRAT1Q6PIZ9 186 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 CCBE1Q6UXH8 406 aaPredicted RBP7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 TMEM17Q86X19 198 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 H1FOOQ8IZA3 346 aaPredicted RBP7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 ARRDC1Q8N5I2 433 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 TERB2Q8NHR7 220 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 C8orf46Q8TAG6 207 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 CHPT1Q8WUD6 406 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 GIMAP1Q8WWP7 306 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 TOMM40LQ969M1 308 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 SUCNR1Q9BXA5 334 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 KRTAP4-6Q9BYQ5 205 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 TAS2R3Q9NYW6 316 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 IDI2-AS1Q9NZ38 188 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 ZNRD1Q9P1U0 126 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 GNG12Q9UBI6 72 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 ZNF69Q9UC07 566 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 OPN4Q9UHM6 478 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 SCP2D1Q9UJQ7 156 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 RNF150Q9ULK6 438 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 VSIG4Q9Y279 399 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 MYO9AB2RTY4 2548 aa7.99□□□□□ -1.13
SNRNP40-201ENST00000263694 A0A1B0GVG6 124 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 ARPC1BO15143 372 aaKnown RBP7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 SLC31A2O15432 143 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 NDUFB6O95139 128 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 PTTG1O95997 202 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 PPYP01298 95 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 LIPFP07098 398 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 CTXN2P0C2S0 81 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 ZBTB25P24278 435 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 FPR2P25090 351 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 GNG10P50151 68 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 ZNF134P52741 427 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 MORN2Q502X0 79 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 CD276Q5ZPR3 534 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 ZNF554Q86TJ5 538 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 LHFPL1Q86WI0 220 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 Q8N7P7 452 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 DUSP18Q8NEJ0 188 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 DEDD2Q8WXF8 326 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 UPRTQ96BW1 309 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 PRRT1Q99946 306 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 REG4Q9BYZ8 158 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 FXYD6Q9H0Q3 95 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 GAL3ST2Q9H3Q3 398 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 LINC00574Q9H8X3 128 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 NUDT15Q9NV35 164 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 GFOD1Q9NXC2 390 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 SLC2A8Q9NY64 477 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 LPAR3Q9UBY5 353 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 ITGB1BP2Q9UKP3 347 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 ZANQ9Y493 2812 aa7.98□□□□□ -1.13
SNRNP40-201ENST00000263694 C17orf98A8MV24 154 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms