RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 FBXO9Q9UK97 447 aaPredicted RBP13.19□□□□□ -0.3
VPS26A-201ENST00000263559 ITGB1BP2Q9UKP3 347 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 RBM7Q9Y580 266 aaKnown RBP13.19□□□□□ -0.3
VPS26A-201ENST00000263559 TMEM8BA6NDV4 472 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 K7N7A8 449 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 MGST3O14880 152 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 PLAUP00749 431 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 PRSS54Q6PEW0 395 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 DEFB108BQ8NET1 73 aa13.19□□□□□ -0.3
VPS26A-201ENST00000263559 IFNA7P01567 189 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 LYL1P12980 280 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 S100A10P60903 97 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 INO80EQ8NBZ0 244 aaPredicted RBP13.18□□□□□ -0.3
VPS26A-201ENST00000263559 RFESDQ8TAC1 157 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 ARL11Q969Q4 196 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 TMEM56Q96MV1 263 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 KCNJ16Q9NPI9 418 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 TMEM56-RWDD3S4R434 201 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 PKDREJQ9NTG1 2253 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 SELLP14151 372 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 IRF2P14316 349 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 GNMTQ14749 295 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 STUMQ69YW2 141 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 FOXRED2Q8IWF2 684 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 OR8H3Q8N146 312 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 RRNAD1Q96FB5 475 aaKnown RBP13.18□□□□□ -0.3
VPS26A-201ENST00000263559 PKD1L2Q7Z442 2459 aa13.18□□□□□ -0.3
VPS26A-201ENST00000263559 A0A1B0GW55 424 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 ODAMA1E959 279 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 SIAH2O43255 324 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 CDS2O95674 445 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 DUX4L2P0CJ85 424 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 DUX4L3P0CJ86 424 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 DUX4L4P0CJ87 422 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 DUX4L5P0CJ88 424 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 DUX4L6P0CJ89 424 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 DUX4L7P0CJ90 424 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 F2RP25116 425 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 UCP1P25874 307 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 S100GP29377 79 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 APOBEC3AP31941 199 aaPredicted RBP13.17□□□□□ -0.3
VPS26A-201ENST00000263559 SRPXP78539 464 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 DUX4L9Q6RFH8 374 aaPredicted RBP13.17□□□□□ -0.3
VPS26A-201ENST00000263559 ZNF695Q8IW36 515 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 SELENOHQ8IZQ5 122 aaKnown RBP13.17□□□□□ -0.3
VPS26A-201ENST00000263559 FAM122AQ96E09 287 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 CNTNAP3BQ96NU0 1288 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 CNTNAP3Q9BZ76 1288 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 DUX4Q9UBX2 424 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 UBQLN2Q9UHD9 624 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 TMED3Q9Y3Q3 217 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 C15orf65H3BRN8 121 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 FAM209AQ5JX71 171 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 ZNF561Q8N587 486 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 OR51H1Q8NH63 302 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 OR1S1Q8NH92 325 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 LRRC46Q96FV0 321 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 SDSLQ96GA7 329 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 AKR1E2Q96JD6 320 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 SAP30LQ9HAJ7 183 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 KCNS2Q9ULS6 477 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 ARFGEF3Q5TH69 2177 aa13.17□□□□□ -0.3
VPS26A-201ENST00000263559 TUBAL3A6NHL2 446 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 H0Y980 276 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 MST1LQ2TV78 715 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 TOLLIPQ9H0E2 274 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 IGHV3-43A0A0B4J1X8 118 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 GYPAP02724 150 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 PET100P0DJ07 73 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 IGHV3-43DP0DP04 118 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 PPP1CCP36873 323 aaKnown RBP13.16□□□□□ -0.3
VPS26A-201ENST00000263559 EDDM3BP56851 147 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 TEX36Q5VZQ5 186 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 TRAT1Q6PIZ9 186 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 OR52M1Q8NGK5 317 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 CCL13Q99616 98 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 EGLN1Q9GZT9 426 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 OR2S2Q9NQN1 319 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 RNF150Q9ULK6 438 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 RNF115Q9Y4L5 304 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 DSCAML1Q8TD84 2053 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 SCGB1D2O95969 90 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 MUC1P15941 1255 aaPredicted RBP13.16□□□□□ -0.3
VPS26A-201ENST00000263559 GZMHP20718 246 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 P2RX3P56373 397 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 SLC51BQ86UW2 128 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 DRAM1Q8N682 238 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 NINJ1Q92982 152 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 GAFA1Q96PS6 74 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 DYNLRB1Q9NP97 96 aa13.16□□□□□ -0.3
VPS26A-201ENST00000263559 CISD1Q9NZ45 108 aaKnown RBP13.16□□□□□ -0.3
VPS26A-201ENST00000263559 HCFC1P51610 2035 aa13.15□□□□□ -0.3
VPS26A-201ENST00000263559 KANTRA0A1W2PQU2 76 aa13.15□□□□□ -0.3
VPS26A-201ENST00000263559 MSGN1A6NI15 193 aa13.15□□□□□ -0.3
VPS26A-201ENST00000263559 LRRC30A6NM36 301 aa13.15□□□□□ -0.3
VPS26A-201ENST00000263559 SPINT2O43291 252 aa13.15□□□□□ -0.3
VPS26A-201ENST00000263559 BCL2L11O43521 198 aa13.15□□□□□ -0.3
VPS26A-201ENST00000263559 CR1LQ2VPA4 569 aa13.15□□□□□ -0.3
VPS26A-201ENST00000263559 OR5D13Q8NGL4 314 aa13.15□□□□□ -0.3
VPS26A-201ENST00000263559 LSM5Q9Y4Y9 91 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms