RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 FAM131CQ96AQ9 280 aa8.71□□□□□ -1.01
PALB2-201ENST00000261584 BOD1Q96IK1 185 aa8.71□□□□□ -1.01
PALB2-201ENST00000261584 Q96M66 194 aa8.71□□□□□ -1.01
PALB2-201ENST00000261584 OR2D2Q9H210 308 aa8.71□□□□□ -1.01
PALB2-201ENST00000261584 PARD6AQ9NPB6 346 aa8.71□□□□□ -1.01
PALB2-201ENST00000261584 NBEAQ8NFP9 2946 aa8.71□□□□□ -1.02
PALB2-201ENST00000261584 PMS2P1A4D2B8 440 aa8.71□□□□□ -1.02
PALB2-201ENST00000261584 MBP02144 154 aa8.71□□□□□ -1.02
PALB2-201ENST00000261584 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.71□□□□□ -1.02
PALB2-201ENST00000261584 PRAMEF5Q5TYX0 476 aa8.71□□□□□ -1.02
PALB2-201ENST00000261584 PRAMEF6Q5VXH4 476 aa8.71□□□□□ -1.02
PALB2-201ENST00000261584 RHBDD2Q6NTF9 364 aa8.71□□□□□ -1.02
PALB2-201ENST00000261584 VKORC1L1Q8N0U8 176 aa8.71□□□□□ -1.02
PALB2-201ENST00000261584 SNIP1Q8TAD8 396 aaKnown RBP8.71□□□□□ -1.02
PALB2-201ENST00000261584 VN1R17PQ8TDU5 208 aa8.71□□□□□ -1.02
PALB2-201ENST00000261584 OR4C12Q96R67 309 aa8.71□□□□□ -1.02
PALB2-201ENST00000261584 PSG11Q9UQ72 335 aa8.71□□□□□ -1.02
PALB2-201ENST00000261584 LRRC3CA6NJW4 275 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 LYZL6O75951 148 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 HOXC4P09017 264 aaPredicted RBP8.7□□□□□ -1.02
PALB2-201ENST00000261584 APELAP0DMC3 54 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 P2RY6Q15077 328 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 Q3ZCU0 254 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 DBX2Q6ZNG2 339 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 D2HGDHQ8N465 521 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 ZNF439Q8NDP4 499 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 MRPL30Q8TCC3 161 aaKnown RBP8.7□□□□□ -1.02
PALB2-201ENST00000261584 TMEM18Q96B42 140 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 APH1AQ96BI3 265 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 GPR146Q96CH1 333 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 ABHD14BQ96IU4 210 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 IMMP2LQ96T52 175 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 TPPP3Q9BW30 176 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 ZFHX2Q9C0A1 2572 aaPredicted RBP8.7□□□□□ -1.02
PALB2-201ENST00000261584 IGKV1-27A0A075B6S5 117 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 IGHV3-48P01763 117 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 NXPH1P58417 271 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 ENDOGQ14249 297 aaKnown RBP8.7□□□□□ -1.02
PALB2-201ENST00000261584 FAM53AQ6NSI3 398 aaPredicted RBP8.7□□□□□ -1.02
PALB2-201ENST00000261584 SGK494Q96LW2 274 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 GAPDHP04406 335 aaKnown RBP8.7□□□□□ -1.02
PALB2-201ENST00000261584 RAB35Q15286 201 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 ZNF107Q9UII5 783 aaPredicted RBP8.7□□□□□ -1.02
PALB2-201ENST00000261584 FRYQ5TBA9 3013 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 PRF1P14222 555 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 ZNF17P17021 662 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 DTYMKP23919 212 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 GPX4P36969 197 aaPredicted RBP8.7□□□□□ -1.02
PALB2-201ENST00000261584 CLCF1Q9UBD9 225 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 TINAGQ9UJW2 476 aa8.7□□□□□ -1.02
PALB2-201ENST00000261584 A6NNC1 897 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 OR7C2O60412 319 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 FCGR3BO75015 233 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 VAMP5O95183 116 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 SRP19P09132 144 aaKnown RBP8.69□□□□□ -1.02
PALB2-201ENST00000261584 RBM11P57052 281 aaKnown RBP8.69□□□□□ -1.02
PALB2-201ENST00000261584 TCF23Q7RTU1 214 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 TMEM222Q9H0R3 208 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 KIAA1456Q9P272 454 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 UBE2CO00762 179 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 RHBDL1O75783 438 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 NDUFB4O95168 129 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 PTBP3O95758 552 aaKnown RBP8.69□□□□□ -1.02
PALB2-201ENST00000261584 BCL2P10415 239 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 AESQ08117 197 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 DTX1Q86Y01 620 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 FAM58AQ8N1B3 248 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 MISP3Q96FF7 219 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 ZNF552Q9H707 407 aaPredicted RBP8.69□□□□□ -1.02
PALB2-201ENST00000261584 TMEM100Q9NV29 134 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 IGKV3D-11A0A0A0MRZ8 115 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 TIMM8AO60220 97 aaPredicted RBP8.69□□□□□ -1.02
PALB2-201ENST00000261584 CBR3O75828 277 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 MPLP40238 635 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 MDH2P40926 338 aaKnown RBP8.69□□□□□ -1.02
PALB2-201ENST00000261584 QRFPP83859 136 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 COL10A1Q03692 680 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 ELOBQ15370 118 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 MSMO1Q15800 293 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 SELENOHQ8IZQ5 122 aaKnown RBP8.69□□□□□ -1.02
PALB2-201ENST00000261584 OR2T10Q8NGZ9 312 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 OR4A16Q8NH70 328 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 LEAP2Q969E1 77 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 ZDHHC16Q969W1 377 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 TBX15Q96SF7 602 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 OR2H1Q9GZK4 316 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 B4GALT7Q9UBV7 327 aa8.69□□□□□ -1.02
PALB2-201ENST00000261584 C5orf67F2Z3F1 127 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 CELA3AP09093 270 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 DSCR4P56555 118 aaPredicted RBP8.68□□□□□ -1.02
PALB2-201ENST00000261584 MRPL54Q6P161 138 aaKnown RBP8.68□□□□□ -1.02
PALB2-201ENST00000261584 RABEPKQ7Z6M1 372 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 OR2V1Q8NHB1 315 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 THSD7BQ9C0I4 1608 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 A0A1W2PQM1 296 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 SLC22A20A6NK97 555 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 DBX1A6NMT0 343 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 C11orf94C9JXX5 98 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 FOSL1P15407 271 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 CSRP1P21291 193 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms