RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 LINC00862A6NCI5 91 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 MELTFP08582 738 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 CT62P0C5K7 136 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 COX6B1P14854 86 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 SULT1A2P50226 295 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 PDLIM4P50479 330 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 MVDP53602 400 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 LAMTOR1Q6IAA8 161 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 THSD4Q6ZMP0 1018 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 AMER3Q8N944 861 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 OR4C13Q8NGP0 309 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 OR5C1Q8NGR4 320 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 TMED6Q8WW62 240 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 FAM131CQ96AQ9 280 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 TMEM222Q9H0R3 208 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 SEMA5BQ9P283 1151 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 SLC25A10Q9UBX3 287 aaPredicted RBP3.76□□□□□ -1.81
VPS13C-202ENST00000261517 INSIG2Q9Y5U4 225 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 PRRC2CQ9Y520 2896 aaKnown RBP3.76□□□□□ -1.81
VPS13C-202ENST00000261517 ABCA4P78363 2273 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 RBFOX3A6NFN3 312 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 S100A4P26447 101 aaKnown RBP3.76□□□□□ -1.81
VPS13C-202ENST00000261517 BTN1A1Q13410 526 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 SMUG1Q53HV7 270 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 TBC1D26Q86UD7 250 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 FADS6Q8N9I5 356 aa3.76□□□□□ -1.81
VPS13C-202ENST00000261517 C17orf51A8MQB3 221 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 SPINT1O43278 529 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 EFEMP2O95967 443 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF154Q13106 437 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 ACSM6Q6P461 480 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 OR8D4Q8NGM9 314 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 NUDT8Q8WV74 236 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 POLEQ07864 2286 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 BMPR1BO00238 502 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 CDC42EP2O14613 210 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 GHRHP01286 108 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 BTF3P20290 206 aaKnown RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 PTGER1P34995 402 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 RPS11P62280 158 aaKnown RBP eCLIP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 GNB1P62873 340 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 CD226Q15762 336 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF468Q5VIY5 522 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 OR2T2Q6IF00 324 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 SLC24A4Q8NFF2 622 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 hCG_38984A0A1B0GV85 526 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 ELLP55199 621 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 BCDIN3DQ7Z5W3 292 aaKnown RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 NOL4LQ96MY1 436 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 AQP10Q96PS8 301 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 ZDHHC11Q9H8X9 412 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 PSG11Q9UQ72 335 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 TMEM131Q92545 1883 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 SPRY3O43610 288 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 RPL31P62899 125 aaKnown RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 PRSS45Q7RTY3 260 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 OR5M1Q8NGP8 315 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 DPF1Q92782 380 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 NPDC1Q9NQX5 325 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 SLC6A13Q9NSD5 602 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 GOLT1BQ9Y3E0 138 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 A0A0G2JLM5 398 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 A0A0U1RQK1 487 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 PCP4L1A6NKN8 68 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 RBFOX2O43251 390 aaKnown RBP eCLIP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 ONECUT2O95948 504 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 HSPB1P04792 205 aaKnown RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 IGFBP1P08833 259 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 OR5AC1P0C628 307 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 CCL3P10147 92 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 OR3A4PP47883 348 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 PCSK4Q6UW60 755 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 OR5T1Q8NG75 326 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 FBXO17Q96EF6 278 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 HELTA6NFD8 242 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 A8MWL6 223 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 FCGR3BO75015 233 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 NHLH1Q02575 133 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 TUSC5Q8IXB3 177 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 SMIM8Q96KF7 97 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 METTL26Q96S19 204 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 TINAGL1Q9GZM7 467 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 IL9P15248 144 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 AMTP48728 403 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 DUSP2Q05923 314 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 ZFP62Q8NB50 900 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 OSR1Q8TAX0 266 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 RELTQ969Z4 430 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 RNF5Q99942 180 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 CREBBPQ92793 2442 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 IGLV1-36A0A0B4J1U3 117 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 ZNF705GA8MUZ8 300 aaPredicted RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 NPIPB9F8W1W9 429 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 PRDX2P32119 198 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 CD80P33681 288 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 RPL30P62888 115 aaKnown RBP3.75□□□□□ -1.81
VPS13C-202ENST00000261517 OR52M1Q8NGK5 317 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 OR10G4Q8NGN3 311 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 OR10G9Q8NGN4 311 aa3.75□□□□□ -1.81
VPS13C-202ENST00000261517 OR10G7Q8NGN6 311 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms