RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 ANKUB1A6NFN9 424 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 CRISP2P16562 243 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 CTSSP25774 331 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 GUCA1AP43080 201 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-201ENST00000261443 RAC1P63000 192 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 SUMO1P63165 101 aaKnown RBP6.19□□□□□ -1.42
CSDE1-201ENST00000261443 HHEXQ03014 270 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 OR8B8Q15620 311 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 SPATA45Q537H7 98 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 Q6ZN92 141 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 TMEM144Q7Z5S9 345 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 SPSB1Q96BD6 273 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 NEIL1Q96FI4 390 aaPredicted RBP6.19□□□□□ -1.42
CSDE1-201ENST00000261443 RBM24Q9BX46 236 aaKnown RBP6.19□□□□□ -1.42
CSDE1-201ENST00000261443 WDR61Q9GZS3 305 aaKnown RBP6.19□□□□□ -1.42
CSDE1-201ENST00000261443 RNF208Q9H0X6 261 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 FBRSQ9HAH7 460 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 COPS7AQ9UBW8 275 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 SLC45A2Q9UMX9 530 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 IGKV1-27A0A075B6S5 117 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 A0A0G2JRQ6 117 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 CBY3A6NI87 242 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 A8MXE2 369 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 C1QTNF9BB2RNN3 333 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 PDCD6O75340 191 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 IGKV1D-33P01593 117 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 IGKV1-33P01594 117 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 PLA2G5P39877 138 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 HNRNPA3P51991 378 aaKnown RBP6.19□□□□□ -1.42
CSDE1-201ENST00000261443 EFNA3P52797 238 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 KRTDAPP60985 99 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 IZUMO4Q1ZYL8 232 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 TMEM211Q6ICI0 200 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 OR5D13Q8NGL4 314 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 SGMS2Q8NHU3 365 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 GPR146Q96CH1 333 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 C10orf35Q96D05 121 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 UQCR10Q9UDW1 63 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 TP53TG3Q9ULZ0 132 aa6.19□□□□□ -1.42
CSDE1-201ENST00000261443 UBE2L5PA0A1B0GUS4 154 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 A0A1W2PR80 420 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 OR6C6A6NF89 314 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 PAGE4O60829 102 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 SYNGR4O95473 234 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 CELA2BP08218 269 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-201ENST00000261443 EPHA8P29322 1005 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-201ENST00000261443 COMPP49747 757 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-201ENST00000261443 FOXL1Q12952 345 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 RUNX3Q13761 415 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 SHBQ15464 509 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF542PQ5EBM4 170 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 RTL10Q7L3V2 364 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 BAGE3Q86Y29 109 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 BAGE2Q86Y30 109 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF738Q8NE65 137 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 TAF15Q92804 592 aaKnown RBP eCLIP6.18□□□□□ -1.42
CSDE1-201ENST00000261443 FAM122AQ96E09 287 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 BORCS8Q96FH0 119 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 OR4C12Q96R67 309 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 CCL28Q9NRJ3 127 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 ELOVL5Q9NYP7 299 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 IGKV1D-13A0A0B4J2D9 117 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 KIR2DS5A0A0G2JLQ3 304 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 A0A0G2JNG1 304 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 A0A1W2PN81 502 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF814B7Z6K7 855 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 DIRC3C9JPN6 131 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 KIR2DS3K7RE56 304 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 HS3ST1O14792 307 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 SYNGR2O43760 224 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 PIAS2O75928 621 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 OR7C1O76099 320 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-201ENST00000261443 IGKV1-13P0DP09 117 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 CD99P14209 185 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 LINC00310P59036 64 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 KIR2DS5Q14953 304 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 FFAR4Q5NUL3 377 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 ZNF468Q5VIY5 522 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-201ENST00000261443 Q6ZVH6 145 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 SMIM15Q7Z3B0 74 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 LINC01551Q86U37 167 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 SIGLECL1Q8N7X8 197 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 C12orf76Q8N812 135 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-201ENST00000261443 GJC3Q8NFK1 279 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 OR4C5Q8NGB2 326 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-201ENST00000261443 RNF2Q99496 336 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 FAM103A1Q9BTL3 118 aaKnown RBP6.18□□□□□ -1.42
CSDE1-201ENST00000261443 PARD6GQ9BYG4 376 aaPredicted RBP6.18□□□□□ -1.42
CSDE1-201ENST00000261443 SOHLH2Q9NX45 425 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 COX11Q9Y6N1 276 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 LOC105371242A0A075B767 164 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 TRAV34A0A0B4J273 112 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 IGKV1-12A0A0C4DH73 117 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 CTXND1A0A1B0GTU2 59 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 SLC22A20A6NK97 555 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 H0Y980 276 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 M0R135 149 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 MLNRO43193 412 aa6.18□□□□□ -1.42
CSDE1-201ENST00000261443 TRAF3IP2O43734 574 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms