RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 CHRFAM7AQ494W8 412 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 METTL11BQ5VVY1 283 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 C1orf122Q6ZSJ8 110 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 TMEM229BQ8NBD8 167 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 METTL8Q9H825 291 aaKnown RBP12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 RAB9BQ9NP90 201 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 OR2S2Q9NQN1 319 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 SLC23A1Q9UHI7 598 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 ZNF107Q9UII5 783 aaPredicted RBP12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 SVEP1Q4LDE5 3571 aa12.94□□□□□ -0.34
CCDC90B-201ENST00000260054 hCG_1809904A0A1W2PP81 198 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 A0A1W2PPE2 198 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 A0A1W2PR64 198 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 A0A1W2PRV1 198 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 FAM172BPA6NC97 362 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 CSF1P09603 554 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 GATA3P23771 443 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 NFYBP25208 207 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 TAS2R19P59542 299 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 TRIQKQ629K1 86 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 FAHD2BQ6P2I3 314 aaPredicted RBP12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 VMO1Q7Z5L0 202 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 OR10A7Q8NGE5 316 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 OR4D10Q8NGI6 311 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 TNFRSF14Q92956 283 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 FAHD2AQ96GK7 314 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 TBX15Q96SF7 602 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 PCGF1Q9BSM1 259 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 TMPRSS13Q9BYE2 586 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 TAS2R8Q9NYW2 309 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 SESN1Q9Y6P5 492 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 TRBV6-7A0A0A0MS04 114 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 M0QYG6 137 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 TOX4O94842 621 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 IGHV3-7P01780 117 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 CD74P04233 296 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 PRTN3P24158 256 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 TAS2R46P59540 309 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 KLF9Q13886 244 aaPredicted RBP12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 CDK10Q15131 360 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 OVCH2Q7RTZ1 564 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 TOMM5Q8N4H5 51 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 OR10V1Q8NGI7 309 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 OR52M1Q8NGK5 317 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 OR5H2Q8NGV7 314 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 LEAP2Q969E1 77 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 TMUB1Q9BVT8 246 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 SUCNR1Q9BXA5 334 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 TINAGL1Q9GZM7 467 aaPredicted RBP12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 C7orf69Q9H7B7 122 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 UNKLQ9H9P5 680 aaKnown RBP12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 NECAP2Q9NVZ3 263 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 GFOD1Q9NXC2 390 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 GNG12Q9UBI6 72 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 JPT1Q9UK76 154 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 AUP1Q9Y679 476 aa12.93□□□□□ -0.34
CCDC90B-201ENST00000260054 DIRAS3O95661 229 aa12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 AVPP01185 164 aa12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 CTXN2P0C2S0 81 aa12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 ZBTB25P24278 435 aa12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 PPP1CCP36873 323 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 OR3A3P47888 321 aa12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 IFITM3Q01628 133 aa12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 STEAP3Q658P3 488 aa12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 FAAP20Q6NZ36 180 aa12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 STEAP1BQ6NZ63 245 aa12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 CADM3Q8N126 398 aa12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 PARP12Q9H0J9 701 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 TMEM133Q9H2Q1 129 aa12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 ABCB10Q9NRK6 738 aa12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 EHFQ9NZC4 300 aa12.92□□□□□ -0.34
CCDC90B-201ENST00000260054 TLN2Q9Y4G6 2542 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 A0A087X0M5 115 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 A0A1B0GX30 115 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 HSPA12AO43301 675 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 CD5LO43866 347 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 UPK1BO75841 260 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 RAB3DO95716 219 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 OR5H8P0DN80 308 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 TBPP20226 339 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 CEACAM6P40199 344 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 KLRD1Q13241 179 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 TMEM30BQ3MIR4 351 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 MORN2Q502X0 79 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 ACTBL2Q562R1 376 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 RNASE10Q5GAN6 216 aaKnown RBP12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 VAX1Q5SQQ9 334 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 ZNF57Q68EA5 555 aaPredicted RBP12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 HCP5Q6MZN7 132 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 OR4C16Q8NGL9 310 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 OR10J5Q8NHC4 309 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 SMR3AQ99954 134 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 GINS4Q9BRT9 223 aa12.91□□□□□ -0.34
CCDC90B-201ENST00000260054 RNASEK-C17orf49H0YIS7 233 aa12.9□□□□□ -0.34
CCDC90B-201ENST00000260054 J3QLI3 93 aa12.9□□□□□ -0.34
CCDC90B-201ENST00000260054 YPEL1O60688 119 aa12.9□□□□□ -0.34
CCDC90B-201ENST00000260054 AKAIN1P0CW23 69 aa12.9□□□□□ -0.34
CCDC90B-201ENST00000260054 CD99P14209 185 aa12.9□□□□□ -0.34
CCDC90B-201ENST00000260054 HOXB4P17483 251 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-201ENST00000260054 NFYAP23511 347 aaPredicted RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms