RNA–Protein interactions for RNA: ENST00000259154.8

KCTD3-201, Transcript of potassium channel tetramerization domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KCTD3, Length 3,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD3-201ENST00000259154 CHD3Q12873 2000 aaKnown RBP12.88□□□□□ -0.35
KCTD3-201ENST00000259154 SHISA7A6NL88 538 aa12.88□□□□□ -0.35
KCTD3-201ENST00000259154 CEACAM6P40199 344 aa12.88□□□□□ -0.35
KCTD3-201ENST00000259154 MDH2P40926 338 aaKnown RBP12.88□□□□□ -0.35
KCTD3-201ENST00000259154 TMEM183BQ1AE95 376 aa12.88□□□□□ -0.35
KCTD3-201ENST00000259154 ACOT6Q3I5F7 207 aaPredicted RBP12.88□□□□□ -0.35
KCTD3-201ENST00000259154 SNAI3Q3KNW1 292 aa12.88□□□□□ -0.35
KCTD3-201ENST00000259154 LHFPL2Q6ZUX7 228 aa12.88□□□□□ -0.35
KCTD3-201ENST00000259154 TMPRSS7Q7RTY8 843 aa12.88□□□□□ -0.35
KCTD3-201ENST00000259154 AGBL5Q8NDL9 886 aa12.88□□□□□ -0.35
KCTD3-201ENST00000259154 OR1F12Q8NHA8 337 aa12.88□□□□□ -0.35
KCTD3-201ENST00000259154 DXOO77932 396 aaKnown RBP12.87□□□□□ -0.35
KCTD3-201ENST00000259154 NDUFB4O95168 129 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 GLB1P16278 677 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 FSTP19883 344 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 MST1LQ2TV78 715 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 TPRX1Q8N7U7 411 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 PRRC2CQ9Y520 2896 aaKnown RBP12.87□□□□□ -0.35
KCTD3-201ENST00000259154 A0A0A6YYD4 124 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 RAB29O14966 203 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 NPBWR2P48146 333 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 PCBD1P61457 104 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 HERPUD1Q15011 391 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 CLDN23Q96B33 292 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 SLC35D1Q9NTN3 355 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 MT-CO2P00403 227 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 TMEM11P17152 192 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 CNN1P51911 297 aaKnown RBP12.87□□□□□ -0.35
KCTD3-201ENST00000259154 TEX30Q5JUR7 227 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 RNASEKQ6P5S7 137 aaKnown RBP12.87□□□□□ -0.35
KCTD3-201ENST00000259154 MARS2Q96GW9 593 aaKnown RBP12.87□□□□□ -0.35
KCTD3-201ENST00000259154 MRGPRX4Q96LA9 322 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 UTP23Q9BRU9 249 aaKnown RBP12.87□□□□□ -0.35
KCTD3-201ENST00000259154 SRD5A3Q9H8P0 318 aa12.87□□□□□ -0.35
KCTD3-201ENST00000259154 C5orf63A6NC05 138 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 PGPEP1LA6NFU8 196 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 CRYM-AS1A6NIL9 109 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 F8VVB4 439 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 F8VWA3 439 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 CYB5R3P00387 301 aaPredicted RBP12.86□□□□□ -0.35
KCTD3-201ENST00000259154 OR3A1P47881 315 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 GLIPR1P48060 266 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 NUFIP2Q7Z417 695 aaKnown RBP12.86□□□□□ -0.35
KCTD3-201ENST00000259154 CALHM1Q8IU99 346 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 FOXB1Q99853 325 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 CHST5Q9GZS9 411 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 MYOTQ9UBF9 498 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 ZNF107Q9UII5 783 aaPredicted RBP12.86□□□□□ -0.35
KCTD3-201ENST00000259154 TICRRQ7Z2Z1 1910 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 IGHV1OR21-1A0A087WYE8 117 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 SNURFLB1AK76 121 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 CD5P06127 495 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 SRP19P09132 144 aaKnown RBP12.86□□□□□ -0.35
KCTD3-201ENST00000259154 SMIM10L1P0DMW3 83 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 AGAP20933 346 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 MPLP40238 635 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 ELOBQ15370 118 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 SPEM1Q8N4L4 309 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 NEIL1Q96FI4 390 aaPredicted RBP12.86□□□□□ -0.35
KCTD3-201ENST00000259154 SMIM10Q96HG1 83 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 FOXJ2Q9P0K8 574 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 FZR1Q9UM11 496 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 STARD10Q9Y365 291 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 MTCH2Q9Y6C9 303 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 FBLL1A6NHQ2 334 aaKnown RBP12.86□□□□□ -0.35
KCTD3-201ENST00000259154 LILRA5A6NI73 299 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 CELA2AP08217 269 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 HOXC4P09017 264 aaPredicted RBP12.86□□□□□ -0.35
KCTD3-201ENST00000259154 FOLR3P41439 243 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 SSR4P51571 173 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 ALKBH6Q3KRA9 238 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 GUSBP11Q6P575 273 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 HIST1H2BLQ99880 126 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 NAGKQ9UJ70 344 aa12.86□□□□□ -0.35
KCTD3-201ENST00000259154 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.86□□□□□ -0.351e-7■■■■■ 28.7
KCTD3-201ENST00000259154 DUXBA0A1W2PPF3 345 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 TRDCB7Z8K6 153 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 CSN3P07498 182 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 BCL3P20749 454 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 HEPN1Q6WQI6 88 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 DENND4AQ7Z401 1863 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 TNFSF14O43557 240 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 HOXB1P14653 301 aaPredicted RBP12.85□□□□□ -0.35
KCTD3-201ENST00000259154 G6PCP35575 357 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 CDC34P49427 236 aaPredicted RBP12.85□□□□□ -0.35
KCTD3-201ENST00000259154 GNG10P50151 68 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 PNRC1Q12796 327 aaPredicted RBP12.85□□□□□ -0.35
KCTD3-201ENST00000259154 IL24Q13007 206 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 EIF3IQ13347 325 aaKnown RBP12.85□□□□□ -0.35
KCTD3-201ENST00000259154 Q56UQ5 140 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 GJE1A6NN92 205 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 ZNF814B7Z6K7 855 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 HSPB1P04792 205 aaKnown RBP12.85□□□□□ -0.35
KCTD3-201ENST00000259154 UNQ6494/PRO21346Q6UXR6 183 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 OR5B3Q8NH48 314 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 SPSB1Q96BD6 273 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 OR4C12Q96R67 309 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 FAM173AQ9BQD7 235 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 STRADBQ9C0K7 418 aa12.85□□□□□ -0.35
KCTD3-201ENST00000259154 FUT6P51993 359 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms