RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 WNT11O96014 354 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 SLC25A5P05141 298 aaKnown RBP5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 SLC35E2P0CK97 266 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 IGLC2P0DOY2 106 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 IGLC3P0DOY3 106 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 EXOSC7Q15024 291 aaKnown RBP5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 OR4A5Q8NH83 315 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 SPANXB1Q9NS25 103 aaPredicted RBP5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 PPP1CCP36873 323 aaKnown RBP5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 CDK5R1Q15078 307 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 SRSF7Q16629 238 aaKnown RBP eCLIP5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 IGF2-ASQ6U949 168 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 Q7L0L9 218 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 YRDCQ86U90 279 aaKnown RBP5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 ZNF784Q8NCA9 323 aaPredicted RBP5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 NEUROG1Q92886 237 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 DAZLQ92904 295 aaKnown RBP5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 PIGLQ9Y2B2 252 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 SRD5A2P31213 254 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 GFRA1P56159 465 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 TRNP1Q6NT89 227 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 BMPERQ8N8U9 685 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 OR5C1Q8NGR4 320 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 GPR84Q9NQS5 396 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 CLEC1BQ9P126 229 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 ANKRD12Q6UB98 2062 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 A8MWV9 139 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 H3BRM9 83 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 PLPP3O14495 311 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 NDUFB2O95178 105 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 EFEMP2O95967 443 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 OR9G9P0C7N8 305 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 FUBP1Q96AE4 644 aaKnown RBP5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 RNF183Q96D59 192 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 MGST2Q99735 147 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 LINC00597Q9H2U6 94 aa5.91□□□□□ -1.46
PDGFRA-201ENST00000257290 C9orf118A6NHY6 69 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 HEPACAM2A8MVW5 462 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 OR2H2O95918 312 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 CD1AP06126 327 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 FCGR3AP08637 254 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 SRSF9Q13242 221 aaKnown RBP eCLIP5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 STAC2Q6ZMT1 411 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 TMEM99Q8N816 258 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 SYT8Q8NBV8 401 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 SLC16A11Q8NCK7 471 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 MS4A6AQ9H2W1 248 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 OARD1Q9Y530 152 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 P2RY10O00398 339 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 CLDN15P56746 228 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 ZXDBP98169 803 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 OXLD1Q5BKU9 147 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 SPNS2Q8IVW8 549 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 SIGLEC12Q96PQ1 595 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 RAB40CQ96S21 281 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 RNF222A6NCQ9 220 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 F8VVB4 439 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 F8VWA3 439 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 CLEC3AO75596 197 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 SLC25A6P12236 298 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 IGFBP2P18065 325 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 LTBP1Q14766 1721 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 MOGAT3Q86VF5 341 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 EDA2RQ9HAV5 297 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 RABAC1Q9UI14 185 aa5.9□□□□□ -1.46
PDGFRA-201ENST00000257290 CD70P32970 193 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 CTSOP43234 321 aaPredicted RBP5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 ZNF585BQ52M93 769 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 LAIR2Q6ISS4 152 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 LSRQ86X29 649 aaPredicted RBP5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 TP53INP2Q8IXH6 220 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 PLPPR1Q8TBJ4 325 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 HOXB13Q92826 284 aaPredicted RBP5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 HES7Q9BYE0 225 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 NPFFR1Q9GZQ6 430 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 TMEM30AQ9NV96 361 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 ERG28Q9UKR5 140 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 ASPDHA6ND91 283 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 TNFP01375 233 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 TRACP01848 142 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 CXCL10P02778 98 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 PI3P19957 117 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 FUT6P51993 359 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 MORN2Q502X0 79 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 ZNF324BQ6AW86 544 aaPredicted RBP5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 DECR2Q9NUI1 292 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 TRAV9-1A0A075B6T8 112 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 KIR2DS5A0A0G2JLQ3 304 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 A0A0G2JNG1 304 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 HOXB2P14652 356 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 ARL16Q0P5N6 197 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 MALLQ13021 153 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 KIR2DS5Q14953 304 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 SCGB1D4Q6XE38 83 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 OR10J6PQ8NGY7 276 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 OR8B2Q96RD0 313 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 HIST1H4GQ99525 98 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 TMEM59Q9BXS4 323 aa5.9□□□□□ -1.47
PDGFRA-201ENST00000257290 LSM2Q9Y333 95 aaKnown RBP5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms