RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 IL19Q9UHD0 177 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 PDE6DO43924 150 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 KHDC3LQ587J8 217 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 MRGPRGQ86SM5 289 aa16.43■□□□□ 0.22
PTPRE-201ENST00000254667 TRBV5-7A0A0A0MS05 114 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 MPV17P39210 176 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 TEX29Q8N6K0 151 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 PRSS3P2Q8NHM4 247 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 OR2T8A6NH00 312 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 H0Y980 276 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 MMP7P09237 267 aaPredicted RBP16.42■□□□□ 0.22
PTPRE-201ENST00000254667 CSRP2Q16527 193 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 CDCP2Q5VXM1 449 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 CD200R1LQ6Q8B3 271 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 SSMEM1Q8WWF3 244 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 KCNK7Q9Y2U2 307 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 GREB1LQ9C091 1923 aaPredicted RBP16.42■□□□□ 0.22
PTPRE-201ENST00000254667 MED19A0JLT2 244 aaPredicted RBP16.42■□□□□ 0.22
PTPRE-201ENST00000254667 GAPDHP04406 335 aaKnown RBP16.42■□□□□ 0.22
PTPRE-201ENST00000254667 RNASEKQ6P5S7 137 aaKnown RBP16.42■□□□□ 0.22
PTPRE-201ENST00000254667 OR8I2Q8N0Y5 310 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 AMELYQ99218 206 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 CCL13Q99616 98 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 SEC11CQ9BY50 192 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 CTXND1A0A1B0GTU2 59 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 IGSF23A1L1A6 192 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 CXorf1O96002 111 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 HBZP02008 142 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 PRF1P14222 555 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 GP6Q9HCN6 339 aa16.42■□□□□ 0.22
PTPRE-201ENST00000254667 IGKV1D-42A0A075B6H8 117 aa16.41■□□□□ 0.22
PTPRE-201ENST00000254667 OR2H2O95918 312 aa16.41■□□□□ 0.22
PTPRE-201ENST00000254667 IQCJQ1A5X6 159 aa16.41■□□□□ 0.22
PTPRE-201ENST00000254667 OR10G8Q8NGN5 311 aa16.41■□□□□ 0.22
PTPRE-201ENST00000254667 PARP11Q9NR21 331 aa16.41■□□□□ 0.22
PTPRE-201ENST00000254667 RCC2Q9P258 522 aaKnown RBP16.41■□□□□ 0.22
PTPRE-201ENST00000254667 PTTG1IPP53801 180 aa16.41■□□□□ 0.22
PTPRE-201ENST00000254667 FAM206AQ9NX38 181 aa16.41■□□□□ 0.22
PTPRE-201ENST00000254667 NAGKQ9UJ70 344 aa16.41■□□□□ 0.22
PTPRE-201ENST00000254667 KIAA1324LA8MWY0 1029 aaPredicted RBP16.41■□□□□ 0.22
PTPRE-201ENST00000254667 PITX3O75364 302 aa16.41■□□□□ 0.22
PTPRE-201ENST00000254667 PPP1R32Q7Z5V6 425 aa16.41■□□□□ 0.22
PTPRE-201ENST00000254667 ITLN1Q8WWA0 313 aa16.41■□□□□ 0.22
PTPRE-201ENST00000254667 NPAS1Q99742 590 aa16.41■□□□□ 0.22
PTPRE-201ENST00000254667 HSF4Q9ULV5 492 aa16.41■□□□□ 0.22
PTPRE-201ENST00000254667 TGIF1Q15583 401 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 ZXDCQ2QGD7 858 aaPredicted RBP16.4■□□□□ 0.22
PTPRE-201ENST00000254667 CLEC9AQ6UXN8 241 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 FAM24BQ8N5W8 94 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 WDR90Q96KV7 1748 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 GFRA3O60609 400 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 VAMP8Q9BV40 100 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 TMEM218A2RU14 115 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 HLA-DQB1P01920 261 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 CTSBP07858 339 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 COX6B1P14854 86 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 KCNMB1Q16558 191 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 C10orf128Q5T292 105 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 OR2T10Q8NGZ9 312 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 WFDC6Q9BQY6 131 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 PCGF1Q9BSM1 259 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 CISD1Q9NZ45 108 aaKnown RBP16.4■□□□□ 0.22
PTPRE-201ENST00000254667 RPL30P62888 115 aaKnown RBP16.4■□□□□ 0.22
PTPRE-201ENST00000254667 FDX2Q6P4F2 183 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 MS4A3Q96HJ5 214 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 CLEC5AQ9NY25 188 aa16.4■□□□□ 0.22
PTPRE-201ENST00000254667 GAMTQ14353 236 aa16.39■□□□□ 0.21
PTPRE-201ENST00000254667 IL17BQ9UHF5 180 aa16.39■□□□□ 0.21
PTPRE-201ENST00000254667 TNFSF18Q9UNG2 199 aa16.39■□□□□ 0.21
PTPRE-201ENST00000254667 CABIN1Q9Y6J0 2220 aa16.39■□□□□ 0.21
PTPRE-201ENST00000254667 TEX50A0A1B0GTY4 177 aa16.39■□□□□ 0.21
PTPRE-201ENST00000254667 TMEM30BQ3MIR4 351 aa16.39■□□□□ 0.21
PTPRE-201ENST00000254667 ABHD14BQ96IU4 210 aa16.39■□□□□ 0.21
PTPRE-201ENST00000254667 TNFRSF19Q9NS68 423 aa16.39■□□□□ 0.21
PTPRE-201ENST00000254667 CDRT15L2A8MXV6 281 aa16.39■□□□□ 0.21
PTPRE-201ENST00000254667 ORM1P02763 201 aa16.39■□□□□ 0.21
PTPRE-201ENST00000254667 WDR31Q8NA23 367 aa16.39■□□□□ 0.21
PTPRE-201ENST00000254667 BVESQ8NE79 360 aa16.39■□□□□ 0.21
PTPRE-201ENST00000254667 SEC16AO15027 2179 aa16.39■□□□□ 0.21
PTPRE-201ENST00000254667 NINQ8N4C6 2090 aa16.39■□□□□ 0.21
PTPRE-201ENST00000254667 SPINK4O60575 86 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 ARG1P05089 322 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 HIST1H1EP10412 219 aaKnown RBP16.38■□□□□ 0.21
PTPRE-201ENST00000254667 C11orf42Q8N5U0 333 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 ZNF645Q8N7E2 425 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 LILRB1Q8NHL6 650 aaPredicted RBP16.38■□□□□ 0.21
PTPRE-201ENST00000254667 C12orf57Q99622 126 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 SRXN1Q9BYN0 137 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 LINC00470Q9BZP3 86 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 P01737 135 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 PAFAH1B2P68402 229 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 CALHM1Q8IU99 346 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 TMEM54Q969K7 222 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 TMEM229AB2RXF0 380 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 NEURL1O76050 574 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 FABP4P15090 132 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 SERF2P84101 59 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 CORTO00230 105 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 PGA5P0DJD9 388 aa16.38■□□□□ 0.21
PTPRE-201ENST00000254667 RPL27AP46776 148 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms