RNA–Protein interactions for RNA: ENST00000249499.7

HOXD9-201, Transcript of homeobox D9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD9, Length 1,870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD9-201ENST00000249499 COL10A1Q03692 680 aa19.21■□□□□ 0.67
HOXD9-201ENST00000249499 UQCC3Q6UW78 93 aa19.21■□□□□ 0.67
HOXD9-201ENST00000249499 GALNT11Q8NCW6 608 aa19.21■□□□□ 0.67
HOXD9-201ENST00000249499 SAT2Q96F10 170 aaPredicted RBP19.21■□□□□ 0.67
HOXD9-201ENST00000249499 MEGF10Q96KG7 1140 aa19.21■□□□□ 0.67
HOXD9-201ENST00000249499 OR2S2Q9NQN1 319 aa19.21■□□□□ 0.67
HOXD9-201ENST00000249499 TRAV39A0A0B4J263 110 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 RAB19A4D1S5 217 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 C12orf77C9JDV5 145 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 ADAM20O43506 726 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 FAM157CP0CG43 387 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 CD40P25942 277 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 PRR18Q8N4B5 295 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 PPP1R35Q8TAP8 253 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 LSM10Q969L4 123 aaKnown RBP19.2■□□□□ 0.66
HOXD9-201ENST00000249499 ARV1Q9H2C2 271 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 JKAMPQ9P055 326 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 RBM7Q9Y580 266 aaKnown RBP19.2■□□□□ 0.66
HOXD9-201ENST00000249499 NBEAQ8NFP9 2946 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 C16orf97H3BN30 126 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 TNFSF12O43508 249 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 PRDX2P32119 198 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 UCNP55089 124 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 ID3Q02535 119 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 FAM216AQ8WUB2 273 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 PLEKHF2Q9H8W4 249 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 TAS2R3Q9NYW6 316 aa19.2■□□□□ 0.66
HOXD9-201ENST00000249499 BORCS7-ASMTA0A0B4J1R7 106 aa19.19■□□□□ 0.66
HOXD9-201ENST00000249499 A0A1B0GU03 582 aa19.19■□□□□ 0.66
HOXD9-201ENST00000249499 ATP6V1G2-DDX39BF2Z307 99 aa19.19■□□□□ 0.66
HOXD9-201ENST00000249499 IL2RGP31785 369 aa19.19■□□□□ 0.66
HOXD9-201ENST00000249499 AESQ08117 197 aa19.19■□□□□ 0.66
HOXD9-201ENST00000249499 KRBOX4Q5JUW0 171 aa19.19■□□□□ 0.66
HOXD9-201ENST00000249499 MARC2Q969Z3 335 aa19.19■□□□□ 0.66
HOXD9-201ENST00000249499 OR2V2Q96R30 315 aa19.19■□□□□ 0.66
HOXD9-201ENST00000249499 LPAR3Q9UBY5 353 aa19.19■□□□□ 0.66
HOXD9-201ENST00000249499 ITPR1Q14643 2758 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 TMEM8BA6NDV4 472 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 CCKARP32238 428 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 GABRA2P47869 451 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 TMPRSS3P57727 454 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 RBPJQ06330 500 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 ALKBH2Q6NS38 261 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 TMEM108Q6UXF1 575 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 CD177Q8N6Q3 437 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 ZNF645Q8N7E2 425 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 LINC00052Q96N35 136 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 ZDHHC8Q9ULC8 765 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 ZNF737O75373 536 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 LHBP01229 141 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 HBZP02008 142 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 PSG2P11465 335 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 PTAFRP25105 342 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 STPG2Q8N412 459 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 OR2C3Q8N628 320 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 OR51H1Q8NH63 302 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 GPHA2Q96T91 129 aa19.18■□□□□ 0.66
HOXD9-201ENST00000249499 HEATR1Q9H583 2144 aaKnown RBP19.17■□□□□ 0.66
HOXD9-201ENST00000249499 PITX3O75364 302 aa19.17■□□□□ 0.66
HOXD9-201ENST00000249499 OR8U9P0C7N5 309 aa19.17■□□□□ 0.66
HOXD9-201ENST00000249499 M6PRP20645 277 aa19.17■□□□□ 0.66
HOXD9-201ENST00000249499 SULT1A2P50226 295 aa19.17■□□□□ 0.66
HOXD9-201ENST00000249499 GCSAMQ8N6F7 178 aa19.17■□□□□ 0.66
HOXD9-201ENST00000249499 OR8U1Q8NH10 309 aa19.17■□□□□ 0.66
HOXD9-201ENST00000249499 OR1L1Q8NH94 360 aa19.17■□□□□ 0.66
HOXD9-201ENST00000249499 NINJ1Q92982 152 aa19.17■□□□□ 0.66
HOXD9-201ENST00000249499 ARL11Q969Q4 196 aa19.17■□□□□ 0.66
HOXD9-201ENST00000249499 ERGIC1Q969X5 290 aa19.17■□□□□ 0.66
HOXD9-201ENST00000249499 SNRNP40Q96DI7 357 aaKnown RBP19.17■□□□□ 0.66
HOXD9-201ENST00000249499 SMIM8Q96KF7 97 aa19.17■□□□□ 0.66
HOXD9-201ENST00000249499 SNX22Q96L94 193 aa19.17■□□□□ 0.66
HOXD9-201ENST00000249499 SLC25A31Q9H0C2 315 aa19.17■□□□□ 0.66
HOXD9-201ENST00000249499 KCNS2Q9ULS6 477 aa19.17■□□□□ 0.66
HOXD9-201ENST00000249499 ATMQ13315 3056 aa19.16■□□□□ 0.66
HOXD9-201ENST00000249499 TEX46H3BTG2 121 aa19.16■□□□□ 0.66
HOXD9-201ENST00000249499 HTD2P86397 168 aa19.16■□□□□ 0.66
HOXD9-201ENST00000249499 DRAM1Q8N682 238 aa19.16■□□□□ 0.66
HOXD9-201ENST00000249499 OR1S2Q8NGQ3 325 aa19.16■□□□□ 0.66
HOXD9-201ENST00000249499 NCOR1P1Q9H4R4 102 aa19.16■□□□□ 0.66
HOXD9-201ENST00000249499 NARFLQ9H6Q4 476 aa19.16■□□□□ 0.66
HOXD9-201ENST00000249499 FAM212BQ9NTI7 297 aaPredicted RBP19.16■□□□□ 0.66
HOXD9-201ENST00000249499 LYRM2Q9NU23 88 aaPredicted RBP19.16■□□□□ 0.66
HOXD9-201ENST00000249499 IL19Q9UHD0 177 aa19.16■□□□□ 0.66
HOXD9-201ENST00000249499 EGR1P18146 543 aa19.16■□□□□ 0.66
HOXD9-201ENST00000249499 CR1LQ2VPA4 569 aa19.16■□□□□ 0.66
HOXD9-201ENST00000249499 TCTEX1D1Q8N7M0 179 aa19.16■□□□□ 0.66
HOXD9-201ENST00000249499 MRPL37Q9BZE1 423 aaKnown RBP19.16■□□□□ 0.66
HOXD9-201ENST00000249499 ASF1BQ9NVP2 202 aa19.16■□□□□ 0.66
HOXD9-201ENST00000249499 METRNQ9UJH8 293 aa19.16■□□□□ 0.66
HOXD9-201ENST00000249499 IGKV1D-17A0A075B6S4 117 aa19.15■□□□□ 0.66
HOXD9-201ENST00000249499 MGST3O14880 152 aa19.15■□□□□ 0.66
HOXD9-201ENST00000249499 ADH4P08319 380 aa19.15■□□□□ 0.66
HOXD9-201ENST00000249499 POLR2GP62487 172 aaKnown RBP eCLIP19.15■□□□□ 0.66
HOXD9-201ENST00000249499 VHLLQ6RSH7 139 aa19.15■□□□□ 0.66
HOXD9-201ENST00000249499 PPP1R3CQ9UQK1 317 aa19.15■□□□□ 0.66
HOXD9-201ENST00000249499 SPINT2O43291 252 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 SEC11BP0C7V7 166 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 GZMHP20718 246 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 TNFSF4P23510 183 aa19.14■□□□□ 0.65
HOXD9-201ENST00000249499 GLIPR1P48060 266 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms