RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 FAM173AQ9BQD7 235 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 LY6G6EA0A0G2JKS1 128 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 LOC390937A0A1W2PQ73 354 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 RNF212BA8MTL3 300 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 HIST1H2BKO60814 126 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 HIST1H2BJP06899 126 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 HIST1H2BOP23527 126 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 HIST1H2BBP33778 126 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 HIST1H2BDP58876 126 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 HIST1H2BCP62807 126 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 PNRC1Q12796 327 aaPredicted RBP11.51□□□□□ -0.57
PEX1-201ENST00000248633 RTP5Q14D33 572 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 HIST2H2BEQ16778 126 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.51□□□□□ -0.57
PEX1-201ENST00000248633 SLC25A47Q6Q0C1 308 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 OR10V1Q8NGI7 309 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 HIST1H2BHQ93079 126 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 ZNF837Q96EG3 531 aaPredicted RBP11.51□□□□□ -0.57
PEX1-201ENST00000248633 UHRF2Q96PU4 802 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 HIST1H2BNQ99877 126 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 HIST1H2BMQ99879 126 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 TMEM222Q9H0R3 208 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 MTCH1Q9NZJ7 389 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 VAX2Q9UIW0 290 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 CLDN16Q9Y5I7 305 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 U3KQA8 63 aa11.51□□□□□ -0.57
PEX1-201ENST00000248633 AGAP20933 346 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 CEACAM6P40199 344 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 SLC10A1Q14973 349 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 DCAF10Q5QP82 559 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 CNEP1R1Q8N9A8 125 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 MRPL30Q8TCC3 161 aaKnown RBP11.5□□□□□ -0.57
PEX1-201ENST00000248633 LIN7CQ9NUP9 197 aaKnown RBP11.5□□□□□ -0.57
PEX1-201ENST00000248633 NAT8Q9UHE5 227 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 NDUFB7P17568 137 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 MDH2P40926 338 aaKnown RBP11.5□□□□□ -0.57
PEX1-201ENST00000248633 PRAMEF5Q5TYX0 476 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 PRAMEF6Q5VXH4 476 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 OR4A16Q8NH70 328 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 TRBV6-7A0A0A0MS04 114 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 IGHV3-43A0A0B4J1X8 118 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 IGHV3-43DP0DP04 118 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 CD59P13987 128 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 RAB31Q13636 194 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 BTNL3Q6UXE8 466 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 ZNF439Q8NDP4 499 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 ABHD3Q8WU67 409 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 GINS3Q9BRX5 216 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 RPRMQ9NS64 109 aa11.5□□□□□ -0.57
PEX1-201ENST00000248633 ACTL6BO94805 426 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 SRP19P09132 144 aaKnown RBP11.49□□□□□ -0.57
PEX1-201ENST00000248633 FKBP11Q9NYL4 201 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 M0R143 59 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 HSPB1P04792 205 aaKnown RBP11.49□□□□□ -0.57
PEX1-201ENST00000248633 UMODP07911 640 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 SRD5A2P31213 254 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 ZNF818PQ6ZRF7 136 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 OR2V1Q8NHB1 315 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 MARS2Q96GW9 593 aaKnown RBP11.49□□□□□ -0.57
PEX1-201ENST00000248633 RBKSQ9H477 322 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 DBX1A6NMT0 343 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 CYB5R3P00387 301 aaPredicted RBP11.49□□□□□ -0.57
PEX1-201ENST00000248633 GLIPR1P48060 266 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 RBM11P57052 281 aaKnown RBP11.49□□□□□ -0.57
PEX1-201ENST00000248633 RAC1P63000 192 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 HIKESHIQ53FT3 197 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 PPP1R32Q7Z5V6 425 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 OR10D3Q8NH80 312 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 RNF166Q96A37 237 aaPredicted RBP11.49□□□□□ -0.57
PEX1-201ENST00000248633 APH1AQ96BI3 265 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 SPTA1P02549 2419 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 WIPF3A6NGB9 483 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 KIAA1324LA8MWY0 1029 aaPredicted RBP11.49□□□□□ -0.57
PEX1-201ENST00000248633 NPIPB7O75200 414 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 CLPSP04118 112 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 LIFP15018 202 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 PINX1Q96BK5 328 aaKnown RBP11.49□□□□□ -0.57
PEX1-201ENST00000248633 MOB3AQ96BX8 217 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 ELOVL1Q9BW60 279 aa11.49□□□□□ -0.57
PEX1-201ENST00000248633 A0A0J9YW62 118 aa11.48□□□□□ -0.57
PEX1-201ENST00000248633 ZNF17P17021 662 aa11.48□□□□□ -0.57
PEX1-201ENST00000248633 ERVFRD-1P60508 538 aa11.48□□□□□ -0.57
PEX1-201ENST00000248633 SIGLECL1Q8N7X8 197 aa11.48□□□□□ -0.57
PEX1-201ENST00000248633 VAMP8Q9BV40 100 aa11.48□□□□□ -0.57
PEX1-201ENST00000248633 LYRM2Q9NU23 88 aaPredicted RBP11.48□□□□□ -0.57
PEX1-201ENST00000248633 SOD3P08294 240 aa11.48□□□□□ -0.57
PEX1-201ENST00000248633 SNRPCP09234 159 aaKnown RBP11.48□□□□□ -0.57
PEX1-201ENST00000248633 DPPA3Q6W0C5 159 aa11.48□□□□□ -0.57
PEX1-201ENST00000248633 HEPN1Q6WQI6 88 aa11.48□□□□□ -0.57
PEX1-201ENST00000248633 DENND4AQ7Z401 1863 aa11.48□□□□□ -0.57
PEX1-201ENST00000248633 TIPARPQ7Z3E1 657 aaKnown RBP11.48□□□□□ -0.57
PEX1-201ENST00000248633 REC114Q7Z4M0 266 aa11.48□□□□□ -0.57
PEX1-201ENST00000248633 SLC35E3Q7Z769 313 aa11.48□□□□□ -0.57
PEX1-201ENST00000248633 CLN8Q9UBY8 286 aa11.48□□□□□ -0.57
PEX1-201ENST00000248633 ZNF318Q5VUA4 2279 aa11.47□□□□□ -0.57
PEX1-201ENST00000248633 C11orf94C9JXX5 98 aa11.47□□□□□ -0.57
PEX1-201ENST00000248633 ACOT6Q3I5F7 207 aaPredicted RBP11.47□□□□□ -0.57
PEX1-201ENST00000248633 VHLLQ6RSH7 139 aa11.47□□□□□ -0.57
PEX1-201ENST00000248633 OR1P1Q8NH06 330 aa11.47□□□□□ -0.57
PEX1-201ENST00000248633 A0A0U1RQV5 110 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms