RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 CLEC18CQ8NCF0 446 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 OR5L1Q8NGL2 311 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 DYRK2Q92630 601 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 RITA1Q96K30 269 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 POM121L2Q96KW2 1035 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 SIGLEC12Q96PQ1 595 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 PKIBQ9C010 78 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 C11orf1Q9H5F2 150 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 TMEM160Q9NX00 188 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 PRELID3BQ9Y3B1 194 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 KPTNQ9Y664 436 aa6.65□□□□□ -1.34
CXCR4-201ENST00000241393 DOCK10Q96BY6 2186 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 KMT2EQ8IZD2 1858 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 C5orf49A4QMS7 147 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 CD300LBA8K4G0 201 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 J3KRW8 73 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 NDUFA2O43678 99 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 PVALBP20472 110 aaPredicted RBP6.65□□□□□ -1.35
CXCR4-201ENST00000241393 BCL3P20749 454 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 UCP1P25874 307 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 GNRHRP30968 328 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 HAAOP46952 286 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 NPBWR2P48146 333 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 AKR1C2P52895 323 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 AKR1C1Q04828 323 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 ZNF266Q14584 549 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 PEA15Q15121 130 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 ZNF573Q86YE8 665 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 SLC35G3Q8N808 338 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 ZNF565Q8N9K5 539 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 LFNGQ8NES3 379 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 DMBX1Q8NFW5 382 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 OR8G5Q8NG78 346 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 ERGIC1Q969X5 290 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 FER1L6-AS2Q96M78 137 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 PRRG4Q9BZD6 226 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 SMDT1Q9H4I9 107 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 CALHM2Q9HA72 323 aa6.65□□□□□ -1.35
CXCR4-201ENST00000241393 CNTRLQ7Z7A1 2325 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 SHANK1Q9Y566 2161 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 A0A1B0GW64 132 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 LRP5LA4QPB2 252 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 ANKRD30BLA7E2S9 258 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 ZNF732B4DXR9 585 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 FAM157AC9JC47 383 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 NPIPB11E5RHQ5 1161 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 KLRC4-KLRK1H3BQV0 150 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 SIGLEC5O15389 551 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 NME2P1O60361 137 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 IGHV3-9P01782 118 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 HLA-HP01893 362 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 SFTA3P0C7M3 94 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 SLC25A6P12236 298 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 LMO1P25800 156 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 S100GP29377 79 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 MAGEA5P43359 124 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 ARHGDIBP52566 201 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 GNG3P63215 75 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 PLGLB1Q02325 96 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 IL24Q13007 206 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 FAM76BQ5HYJ3 339 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 ZNF880Q6PDB4 577 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 ZNF695Q8IW36 515 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 MCEMP1Q8IX19 187 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 TMEM105Q8N8V8 129 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 ZFP62Q8NB50 900 aaPredicted RBP6.64□□□□□ -1.35
CXCR4-201ENST00000241393 MDS2Q8NDY4 140 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 OR5P3Q8WZ94 311 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 SLAMF9Q96A28 289 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 TP53RKQ96S44 253 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 FGF23Q9GZV9 251 aaPredicted RBP6.64□□□□□ -1.35
CXCR4-201ENST00000241393 SLC25A31Q9H0C2 315 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 TREM2Q9NZC2 230 aa6.64□□□□□ -1.35
CXCR4-201ENST00000241393 RCL1Q9Y2P8 373 aaKnown RBP6.64□□□□□ -1.35
CXCR4-201ENST00000241393 KLF2Q9Y5W3 355 aaPredicted RBP6.64□□□□□ -1.35
CXCR4-201ENST00000241393 A6NLC8 198 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 UMAD1C9J7I0 102 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 H0Y980 276 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 PITX3O75364 302 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 SP1P08047 785 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 CD59P13987 128 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 VDAC1P21796 283 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 ITGA3P26006 1051 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 APLNRP35414 380 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 SNCAP37840 140 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 RFC3P40938 356 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 NKX2-1P43699 371 aaPredicted RBP6.63□□□□□ -1.35
CXCR4-201ENST00000241393 GPM6AP51674 278 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 EWSR1Q01844 656 aaKnown RBP eCLIP6.63□□□□□ -1.35
CXCR4-201ENST00000241393 SRYQ05066 204 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 BAXQ07812 192 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 OR8G1Q15617 311 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 IGSF11Q5DX21 431 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 SHEQ5VZ18 495 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 TCEAL6Q6IPX3 200 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 MOB1BQ7L9L4 216 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 TBC1D26Q86UD7 250 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 CMTM1Q8IZ96 169 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 OR52M1Q8NGK5 317 aa6.63□□□□□ -1.35
CXCR4-201ENST00000241393 OR5D13Q8NGL4 314 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms