RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 ZNF737O75373 536 aa13.21□□□□□ -0.3
DDX55-201ENST00000238146 TMEM41BQ5BJD5 291 aa13.21□□□□□ -0.3
DDX55-201ENST00000238146 FAM180AQ6UWF9 173 aa13.21□□□□□ -0.3
DDX55-201ENST00000238146 CYP2G1PQ6ZSU1 146 aa13.21□□□□□ -0.3
DDX55-201ENST00000238146 NECAP1Q8NC96 275 aa13.21□□□□□ -0.3
DDX55-201ENST00000238146 ZNF845Q96IR2 970 aaPredicted RBP13.21□□□□□ -0.3
DDX55-201ENST00000238146 HIST1H2AAQ96QV6 131 aa13.21□□□□□ -0.3
DDX55-201ENST00000238146 ACTR3CQ9C0K3 210 aaPredicted RBP13.21□□□□□ -0.3
DDX55-201ENST00000238146 WDR54Q9H977 334 aa13.21□□□□□ -0.3
DDX55-201ENST00000238146 PRSS50Q9UI38 385 aa13.21□□□□□ -0.3
DDX55-201ENST00000238146 KIAA2026Q5HYC2 2103 aa13.21□□□□□ -0.3
DDX55-201ENST00000238146 LY6G6EA0A0G2JKS1 128 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 A0A0G2JMM0 328 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 A0A1W2PPB8 328 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 A0A1W2PRS3 328 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 KIR3DP1A8MWS1 328 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 IFNA1P01562 189 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 GZMHP20718 246 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 ELLP55199 621 aaPredicted RBP13.2□□□□□ -0.3
DDX55-201ENST00000238146 TMEM241Q24JQ0 296 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 COA6Q5JTJ3 125 aaKnown RBP13.2□□□□□ -0.3
DDX55-201ENST00000238146 RPS19BP1Q86WX3 136 aaKnown RBP13.2□□□□□ -0.3
DDX55-201ENST00000238146 OR51G1Q8NGK1 321 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 OR10J5Q8NHC4 309 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 CLDN23Q96B33 292 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 OR4C12Q96R67 309 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 AGMATQ9BSE5 352 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 WDR61Q9GZS3 305 aaKnown RBP13.2□□□□□ -0.3
DDX55-201ENST00000238146 LAMP3Q9UQV4 416 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 U3KQA8 63 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 TRAPPC2LH3BP13 241 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 IGHV3-9P01782 118 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 CCNOP22674 350 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 PLA2G5P39877 138 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 CEACAM21Q3KPI0 293 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 LBHQ53QV2 105 aaPredicted RBP13.2□□□□□ -0.3
DDX55-201ENST00000238146 LILRB2Q8N423 598 aa13.2□□□□□ -0.3
DDX55-201ENST00000238146 LSM10Q969L4 123 aaKnown RBP13.2□□□□□ -0.3
DDX55-201ENST00000238146 CD300LBA8K4G0 201 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 SYNGR1O43759 233 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 IGKV1-5P01602 117 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 SRD5A2P31213 254 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 CEACAM6P40199 344 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 ERVS71-1P61550 626 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 HBG1P69891 147 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 HBG2P69892 147 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 PMS2P11Q13670 270 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 MKXQ8IYA7 352 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 RPP25LQ8N5L8 163 aaKnown RBP13.19□□□□□ -0.3
DDX55-201ENST00000238146 OR10D3Q8NH80 312 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 LHX4Q969G2 390 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 PINX1Q96BK5 328 aaKnown RBP13.19□□□□□ -0.3
DDX55-201ENST00000238146 RIMS4Q9H426 269 aaPredicted RBP13.19□□□□□ -0.3
DDX55-201ENST00000238146 XKRY2A2RUG3 117 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 IGKV1D-33P01593 117 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 IGKV1-33P01594 117 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 CCL2P13500 99 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 TUBG1P23258 451 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 MEF2BQ02080 365 aaPredicted RBP13.19□□□□□ -0.3
DDX55-201ENST00000238146 TLE1Q04724 770 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 P2RY6Q15077 328 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 BSXQ3C1V8 233 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 ZDHHC23Q8IYP9 409 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 RDH5Q92781 318 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 RAB24Q969Q5 203 aa13.19□□□□□ -0.3
DDX55-201ENST00000238146 PIGBOS1A0A0B4J2F0 54 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 HS3ST1O14792 307 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 KBTBD11O94819 623 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 IGLV2-14P01704 120 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 SNRPCP09234 159 aaKnown RBP13.18□□□□□ -0.3
DDX55-201ENST00000238146 RPL23P62829 140 aaKnown RBP13.18□□□□□ -0.3
DDX55-201ENST00000238146 SSX2Q16385 188 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 CENPVQ7Z7K6 275 aaPredicted RBP13.18□□□□□ -0.3
DDX55-201ENST00000238146 TGIF2LYQ8IUE0 185 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 OR1K1Q8NGR3 316 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 ABHD3Q8WU67 409 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 KCNE4Q8WWG9 221 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 ADGRG7Q96K78 797 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 NOL4LQ96MY1 436 aaPredicted RBP13.18□□□□□ -0.3
DDX55-201ENST00000238146 SLC39A9Q9NUM3 307 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 C3orf80F5H4A9 247 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 KLF7O75840 302 aaPredicted RBP13.18□□□□□ -0.3
DDX55-201ENST00000238146 IL18BPO95998 194 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 WNT2P09544 360 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 APLNRP35414 380 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 MLF1P58340 268 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 ZNF66Q6ZN08 573 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 TAF15Q92804 592 aaKnown RBP eCLIP13.18□□□□□ -0.3
DDX55-201ENST00000238146 RPUSD4Q96CM3 377 aaKnown RBP13.18□□□□□ -0.3
DDX55-201ENST00000238146 ZNF488Q96MN9 340 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 NDUFAF3Q9BU61 184 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 OR1A1Q9P1Q5 309 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 CACNA1EQ15878 2313 aa13.18□□□□□ -0.3
DDX55-201ENST00000238146 TRBV6-6A0A0A6YYG2 114 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 TRAV24A0A0B4J272 114 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 PPP5D1E7EU14 171 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 RFPL3SP0C7P2 107 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 GALR1P47211 349 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 ZNF124Q15973 351 aa13.17□□□□□ -0.3
DDX55-201ENST00000238146 SPANXN5Q5MJ07 72 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms