RNA–Protein interactions for RNA: ENST00000230085.12

SNX3-201, Transcript of sorting nexin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX3, Length 1,755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-201ENST00000230085 OR5R1Q8NH85 324 aa17.55■□□□□ 0.4
SNX3-201ENST00000230085 OR1F12Q8NHA8 337 aa17.55■□□□□ 0.4
SNX3-201ENST00000230085 CISD1Q9NZ45 108 aaKnown RBP17.55■□□□□ 0.4
SNX3-201ENST00000230085 ST3GAL6Q9Y274 331 aa17.55■□□□□ 0.4
SNX3-201ENST00000230085 hCG_38984A0A1B0GV85 526 aa17.54■□□□□ 0.4
SNX3-201ENST00000230085 H0YL77 283 aa17.54■□□□□ 0.4
SNX3-201ENST00000230085 VAMP2P63027 116 aa17.54■□□□□ 0.4
SNX3-201ENST00000230085 DMRTC1Q5HYR2 192 aa17.54■□□□□ 0.4
SNX3-201ENST00000230085 SAXO1Q8IYX7 474 aa17.54■□□□□ 0.4
SNX3-201ENST00000230085 PLPPR1Q8TBJ4 325 aa17.54■□□□□ 0.4
SNX3-201ENST00000230085 MBD3L1Q8WWY6 194 aa17.54■□□□□ 0.4
SNX3-201ENST00000230085 GTF3AQ92664 365 aaKnown RBP17.54■□□□□ 0.4
SNX3-201ENST00000230085 CPNE4Q96A23 557 aaPredicted RBP17.54■□□□□ 0.4
SNX3-201ENST00000230085 SLAMF9Q96A28 289 aa17.54■□□□□ 0.4
SNX3-201ENST00000230085 SPSB4Q96A44 273 aa17.54■□□□□ 0.4
SNX3-201ENST00000230085 ZNF385AQ96PM9 386 aaKnown RBP17.54■□□□□ 0.4
SNX3-201ENST00000230085 ULBP2Q9BZM5 246 aa17.54■□□□□ 0.4
SNX3-201ENST00000230085 CTDSP1Q9GZU7 261 aa17.54■□□□□ 0.4
SNX3-201ENST00000230085 RNF115Q9Y4L5 304 aa17.54■□□□□ 0.4
SNX3-201ENST00000230085 FAM208BQ5VWN6 2430 aa17.54■□□□□ 0.4
SNX3-201ENST00000230085 SHANK1Q9Y566 2161 aa17.54■□□□□ 0.4
SNX3-201ENST00000230085 OR5H1A6NKK0 313 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 CTXN2P0C2S0 81 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 MAGEA5P43359 124 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 PKIAP61925 76 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 ZNF695Q8IW36 515 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 C1orf87Q8N0U7 546 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 TMEM251Q8N6I4 163 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 PSMG3Q9BT73 122 aaPredicted RBP17.53■□□□□ 0.4
SNX3-201ENST00000230085 ABHD14AQ9BUJ0 271 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 PARD6GQ9BYG4 376 aaPredicted RBP17.53■□□□□ 0.4
SNX3-201ENST00000230085 UFSP2Q9NUQ7 469 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 ZNF581Q9P0T4 197 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 SLC7A11Q9UPY5 501 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 H0Y980 276 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 NAPSAO96009 420 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 CYB5R3P00387 301 aaPredicted RBP17.53■□□□□ 0.4
SNX3-201ENST00000230085 DYNLT3P51808 116 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 CLDN15P56746 228 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 NKX6-1P78426 367 aaPredicted RBP17.53■□□□□ 0.4
SNX3-201ENST00000230085 PIGYQ3MUY2 71 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 FAM90A2PQ658T7 463 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 FAM180AQ6UWF9 173 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 REC114Q7Z4M0 266 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 TBC1D26Q86UD7 250 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 CPT1CQ8TCG5 803 aa17.53■□□□□ 0.4
SNX3-201ENST00000230085 RNASEH2CQ8TDP1 164 aaKnown RBP17.53■□□□□ 0.4
SNX3-201ENST00000230085 ZNF703Q9H7S9 590 aaPredicted RBP17.53■□□□□ 0.4
SNX3-201ENST00000230085 UBE2J1Q9Y385 318 aaPredicted RBP17.53■□□□□ 0.4
SNX3-201ENST00000230085 ZNF407Q9C0G0 2248 aa17.52■□□□□ 0.4
SNX3-201ENST00000230085 A0A1B0GU03 582 aa17.52■□□□□ 0.4
SNX3-201ENST00000230085 ZNF727A8MUV8 499 aa17.52■□□□□ 0.4
SNX3-201ENST00000230085 CBR3O75828 277 aa17.52■□□□□ 0.4
SNX3-201ENST00000230085 OPN1LWP04000 364 aa17.52■□□□□ 0.4
SNX3-201ENST00000230085 CELA3AP09093 270 aa17.52■□□□□ 0.4
SNX3-201ENST00000230085 CEACAM6P40199 344 aa17.52■□□□□ 0.4
SNX3-201ENST00000230085 DSCR4P56555 118 aaPredicted RBP17.52■□□□□ 0.4
SNX3-201ENST00000230085 SPNS3Q6ZMD2 512 aa17.52■□□□□ 0.4
SNX3-201ENST00000230085 RBM24Q9BX46 236 aaKnown RBP17.52■□□□□ 0.4
SNX3-201ENST00000230085 DNAJC13O75165 2243 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 CLDN34H7C241 214 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 TMEM50AO95807 157 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 CRYABP02511 175 aaKnown RBP17.51■□□□□ 0.39
SNX3-201ENST00000230085 GDF1P27539 372 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 MEX3BQ6ZN04 569 aaKnown RBP17.51■□□□□ 0.39
SNX3-201ENST00000230085 CMTM1Q8IZ96 169 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 ZNF843Q8N446 348 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 DEFB127Q9H1M4 99 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 CDH20Q9HBT6 801 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 Q9N2K0 584 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 TMEM38BQ9NVV0 291 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 MED12Q93074 2177 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 ARID1AO14497 2285 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 ZNF816-ZNF321PA0A0X1KG74 233 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 SSSCA1O60232 199 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 OPN1MWP04001 364 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 TK1P04183 234 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 SOD3P08294 240 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 OPN1MW2P0DN77 364 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 OPN1MW3P0DN78 364 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 PAX9P55771 341 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 RPL23AP62750 156 aaKnown RBP17.51■□□□□ 0.39
SNX3-201ENST00000230085 COA6Q5JTJ3 125 aaKnown RBP17.51■□□□□ 0.39
SNX3-201ENST00000230085 C9orf152Q5JTZ5 239 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 ZNF324BQ6AW86 544 aaPredicted RBP17.51■□□□□ 0.39
SNX3-201ENST00000230085 ZNF343Q6P1L6 599 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 OR10D4PQ8NGN7 298 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 OR2V1Q8NHB1 315 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 C14orf144Q96I85 54 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 FAM210BQ96KR6 192 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 B4GALT7Q9UBV7 327 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 RELNP78509 3460 aa17.51■□□□□ 0.39
SNX3-201ENST00000230085 GJE1A6NN92 205 aa17.5■□□□□ 0.39
SNX3-201ENST00000230085 ADAM20O43506 726 aa17.5■□□□□ 0.39
SNX3-201ENST00000230085 TRAPPC6AO75865 159 aa17.5■□□□□ 0.39
SNX3-201ENST00000230085 RAC1P63000 192 aa17.5■□□□□ 0.39
SNX3-201ENST00000230085 RIPPLY2Q5TAB7 128 aa17.5■□□□□ 0.39
SNX3-201ENST00000230085 RAB40CQ96S21 281 aa17.5■□□□□ 0.39
SNX3-201ENST00000230085 PYGO2Q9BRQ0 406 aa17.5■□□□□ 0.39
SNX3-201ENST00000230085 AGMATQ9BSE5 352 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms