RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 SLC25A28Q96A46 364 aa12.02□□□□□ -0.48
HCFC2-201ENST00000229330 OR2V2Q96R30 315 aa12.02□□□□□ -0.48
HCFC2-201ENST00000229330 WNT16Q9UBV4 365 aa12.02□□□□□ -0.48
HCFC2-201ENST00000229330 H0Y980 276 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 CORTO00230 105 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 KBTBD11O94819 623 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 P01737 135 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 F2RP25116 425 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 PMELP40967 661 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 CCL11P51671 97 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 OR2I1PQ8NGU4 316 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 LRRC3CA6NJW4 275 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 K7EQS6 105 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 SRP19P09132 144 aaKnown RBP12.02□□□□□ -0.49
HCFC2-201ENST00000229330 CXorf67Q86X51 503 aaPredicted RBP12.02□□□□□ -0.49
HCFC2-201ENST00000229330 DPF1Q92782 380 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 IGKV1-8A0A0C4DH67 115 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 PRSS1P07477 247 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 SPRED2Q7Z698 418 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 PDPNQ86YL7 162 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 ARL6IP6Q8N6S5 226 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 OR2M7Q8NG81 312 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 MRGPRDQ8TDS7 321 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 GPBAR1Q8TDU6 330 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 TAF15Q92804 592 aaKnown RBP eCLIP12.02□□□□□ -0.49
HCFC2-201ENST00000229330 RBKSQ9H477 322 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 CLN8Q9UBY8 286 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 MPC1Q9Y5U8 109 aa12.02□□□□□ -0.49
HCFC2-201ENST00000229330 COLCA2A8K830 154 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 CA2P00918 260 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 STAG3L2P0CL84 134 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 HIST1H1EP10412 219 aaKnown RBP12.01□□□□□ -0.49
HCFC2-201ENST00000229330 OR8I2Q8N0Y5 310 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 MOB3AQ96BX8 217 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 PARLQ9H300 379 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 DICER1Q9UPY3 1922 aaKnown RBP12.01□□□□□ -0.49
HCFC2-201ENST00000229330 IGLV1-36A0A0B4J1U3 117 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 HAND1O96004 215 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 MFAP2P55001 183 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 LY6G6FQ5SQ64 297 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 OR1L3Q8NH93 324 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 AAMDCQ9H7C9 122 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 HLA-DQA1P01909 254 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 ERGP11308 486 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 RBM11P57052 281 aaKnown RBP12.01□□□□□ -0.49
HCFC2-201ENST00000229330 SLC35B1P78383 322 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 COL10A1Q03692 680 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 ANKRD37Q7Z713 158 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 SP7Q8TDD2 431 aaPredicted RBP12.01□□□□□ -0.49
HCFC2-201ENST00000229330 OR4C12Q96R67 309 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 ARRDC1-AS1Q9H2J1 176 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 GRIFINA4D1Z8 144 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 CCL7P80098 99 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 TMEM187Q14656 261 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 SSX8Q7RTT4 187 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.01□□□□□ -0.49
HCFC2-201ENST00000229330 IL19Q9UHD0 177 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 LOXL2Q9Y4K0 774 aa12.01□□□□□ -0.49
HCFC2-201ENST00000229330 IGSF23A1L1A6 192 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 FBLL1A6NHQ2 334 aaKnown RBP12□□□□□ -0.49
HCFC2-201ENST00000229330 MELTFP08582 738 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 ZBTB34Q8NCN2 500 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 APOBEC4Q8WW27 367 aaKnown RBP12□□□□□ -0.49
HCFC2-201ENST00000229330 ZP4Q12836 540 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 SAP30LQ9HAJ7 183 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 F8VVB4 439 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 F8VWA3 439 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 RAMP1O60894 148 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 HPRT1P00492 218 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 ERVFRD-1P60508 538 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 RIGQ13278 110 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 SELENOHQ8IZQ5 122 aaKnown RBP12□□□□□ -0.49
HCFC2-201ENST00000229330 LYG1Q8N1E2 194 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 SMIM12Q96EX1 92 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 GNB4Q9HAV0 340 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 RALYQ9UKM9 306 aaKnown RBP12□□□□□ -0.49
HCFC2-201ENST00000229330 IGHV1OR15-9A0A0B4J2B8 117 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 MEX3AA1L020 520 aaKnown RBP12□□□□□ -0.49
HCFC2-201ENST00000229330 THY1P04216 161 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 WIPI1Q5MNZ9 446 aaPredicted RBP12□□□□□ -0.49
HCFC2-201ENST00000229330 SLC25A34Q6PIV7 304 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 OR4F17Q8NGA8 305 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 TMEM230Q96A57 120 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 NDUFS6O75380 124 aaKnown RBP12□□□□□ -0.49
HCFC2-201ENST00000229330 CCL2P13500 99 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 CD1BP29016 333 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 UQCRFS1P47985 274 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 OR8A1Q8NGG7 326 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 EGLN1Q9GZT9 426 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 DEFB127Q9H1M4 99 aa12□□□□□ -0.49
HCFC2-201ENST00000229330 TMEM14DPA8MWL7 114 aa11.99□□□□□ -0.49
HCFC2-201ENST00000229330 VMA21Q3ZAQ7 101 aa11.99□□□□□ -0.49
HCFC2-201ENST00000229330 TEPPQ6URK8 271 aa11.99□□□□□ -0.49
HCFC2-201ENST00000229330 OR4S2Q8NH73 311 aa11.99□□□□□ -0.49
HCFC2-201ENST00000229330 BOD1Q96IK1 185 aa11.99□□□□□ -0.49
HCFC2-201ENST00000229330 A0A0U1RQV5 110 aa11.99□□□□□ -0.49
HCFC2-201ENST00000229330 FABP2P12104 132 aa11.99□□□□□ -0.49
HCFC2-201ENST00000229330 OR2T6Q8NHC8 308 aa11.99□□□□□ -0.49
HCFC2-201ENST00000229330 ZFP30Q9Y2G7 519 aa11.99□□□□□ -0.49
HCFC2-201ENST00000229330 TNFRSF9Q07011 255 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms