RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 IGLV3-21P80748 117 aaPredicted RBP12.54□□□□□ -0.4
PRDM4-201ENST00000228437 RPL19P84098 196 aaKnown RBP12.54□□□□□ -0.4
PRDM4-201ENST00000228437 PLP2Q04941 152 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 TMEM183BQ1AE95 376 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 TEX38Q6PEX7 206 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 PHOSPHO2Q8TCD6 241 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 CIB3Q96Q77 187 aaPredicted RBP12.54□□□□□ -0.4
PRDM4-201ENST00000228437 IL36RNQ9UBH0 155 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 C19orf25Q9UFG5 118 aaPredicted RBP12.54□□□□□ -0.4
PRDM4-201ENST00000228437 LOC102725191A0A1B0GVB3 256 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 NDUFB4O95168 129 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 RAB4AP20338 218 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 CCKARP32238 428 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 NUBP1P53384 320 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 RTL10Q7L3V2 364 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 NEIL1Q96FI4 390 aaPredicted RBP12.54□□□□□ -0.4
PRDM4-201ENST00000228437 RAB40CQ96S21 281 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 PLEKHA3Q9HB20 300 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 ZNF586Q9NXT0 402 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 CLN8Q9UBY8 286 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 FER1L5A0AVI2 2057 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 A8MXE2 369 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 DRD1P21728 446 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 FUT6P51993 359 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 ERVFC1-1P60608 527 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 OR51G1Q8NGK1 321 aa12.54□□□□□ -0.4
PRDM4-201ENST00000228437 IGKV1D-13A0A0B4J2D9 117 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 IGKV1-13P0DP09 117 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 GALNSP34059 522 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 IER3P46695 156 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 HINT1P49773 126 aaPredicted RBP12.53□□□□□ -0.4
PRDM4-201ENST00000228437 IL15RAQ13261 267 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 COTL1Q14019 142 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.53□□□□□ -0.4
PRDM4-201ENST00000228437 FAM58AQ8N1B3 248 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 VWCEQ96DN2 955 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 MANBALQ9NQG1 85 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 NAT8BQ9UHF3 227 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 CLDN16Q9Y5I7 305 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 DEGS1O15121 323 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 PRSS8Q16651 343 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 SLC25A47Q6Q0C1 308 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 CLDN23Q96B33 292 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 HEYLQ9NQ87 328 aaPredicted RBP12.53□□□□□ -0.4
PRDM4-201ENST00000228437 SEMA5BQ9P283 1151 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 NCOR1O75376 2440 aa12.53□□□□□ -0.4
PRDM4-201ENST00000228437 C1QTNF9BB2RNN3 333 aa12.52□□□□□ -0.4
PRDM4-201ENST00000228437 ZNF17P17021 662 aa12.52□□□□□ -0.4
PRDM4-201ENST00000228437 CBLN1P23435 193 aa12.52□□□□□ -0.4
PRDM4-201ENST00000228437 GNB2P62879 340 aa12.52□□□□□ -0.4
PRDM4-201ENST00000228437 OR5R1Q8NH85 324 aa12.52□□□□□ -0.4
PRDM4-201ENST00000228437 RHBDD1Q8TEB9 315 aa12.52□□□□□ -0.4
PRDM4-201ENST00000228437 BORCS7Q96B45 105 aa12.52□□□□□ -0.4
PRDM4-201ENST00000228437 DNAJC4Q9NNZ3 241 aa12.52□□□□□ -0.4
PRDM4-201ENST00000228437 MTCH2Q9Y6C9 303 aa12.52□□□□□ -0.4
PRDM4-201ENST00000228437 ACTL6BO94805 426 aa12.52□□□□□ -0.41
PRDM4-201ENST00000228437 OR2V1Q8NHB1 315 aa12.52□□□□□ -0.41
PRDM4-201ENST00000228437 PINX1Q96BK5 328 aaKnown RBP12.52□□□□□ -0.41
PRDM4-201ENST00000228437 C18orf12Q96KH6 178 aa12.52□□□□□ -0.41
PRDM4-201ENST00000228437 TMEM208Q9BTX3 173 aa12.52□□□□□ -0.41
PRDM4-201ENST00000228437 KCNIP1Q9NZI2 227 aa12.52□□□□□ -0.41
PRDM4-201ENST00000228437 MTCH1Q9NZJ7 389 aa12.52□□□□□ -0.41
PRDM4-201ENST00000228437 IRF2P14316 349 aa12.52□□□□□ -0.41
PRDM4-201ENST00000228437 CD82P27701 267 aa12.52□□□□□ -0.41
PRDM4-201ENST00000228437 ZP4Q12836 540 aa12.52□□□□□ -0.41
PRDM4-201ENST00000228437 MSMO1Q15800 293 aa12.52□□□□□ -0.41
PRDM4-201ENST00000228437 FAM89BQ8N5H3 189 aa12.52□□□□□ -0.41
PRDM4-201ENST00000228437 RFESDQ8TAC1 157 aa12.52□□□□□ -0.41
PRDM4-201ENST00000228437 CISD1Q9NZ45 108 aaKnown RBP12.52□□□□□ -0.41
PRDM4-201ENST00000228437 B3GAT1Q9P2W7 334 aa12.52□□□□□ -0.41
PRDM4-201ENST00000228437 GRPP07492 148 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 CELA2AP08217 269 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 NUFIP2Q7Z417 695 aaKnown RBP12.51□□□□□ -0.41
PRDM4-201ENST00000228437 OR4C5Q8NGB2 326 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 DOCK10Q96BY6 2186 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 ANKRD30BLA7E2S9 258 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 EFNA2O43921 213 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 TMEM50AO95807 157 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 RPL23P62829 140 aaKnown RBP12.51□□□□□ -0.41
PRDM4-201ENST00000228437 OR5AU1Q8NGC0 362 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 NUDT16L1Q9BRJ7 211 aaKnown RBP12.51□□□□□ -0.41
PRDM4-201ENST00000228437 NCOA6Q14686 2063 aaPredicted RBP12.51□□□□□ -0.41
PRDM4-201ENST00000228437 CLPSP04118 112 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 PLPPR5Q32ZL2 321 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 SYT13Q7L8C5 426 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 OBP2AQ9NY56 170 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 CLCF1Q9UBD9 225 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 TRAV38-1A0A0B4J264 116 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 A0A1W2PPC4 97 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 AQP7P3A6NL99 342 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 DEFB108AA8MXU0 73 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 MRPL33O75394 65 aaKnown RBP12.51□□□□□ -0.41
PRDM4-201ENST00000228437 STARD4Q96DR4 205 aa12.51□□□□□ -0.41
PRDM4-201ENST00000228437 BCAT2O15382 392 aaPredicted RBP12.5□□□□□ -0.41
PRDM4-201ENST00000228437 F2RP25116 425 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 PHYHD1Q5SRE7 291 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 FAM90A2PQ658T7 463 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 FAM131CQ96AQ9 280 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 FOXB1Q99853 325 aa12.5□□□□□ -0.41
PRDM4-201ENST00000228437 CACNA1GO43497 2377 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms