RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 TNFSF4P23510 183 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 OR5B3Q8NH48 314 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 NEIL1Q96FI4 390 aaPredicted RBP11.87□□□□□ -0.51
NFKB1-201ENST00000226574 CIB3Q96Q77 187 aaPredicted RBP11.87□□□□□ -0.51
NFKB1-201ENST00000226574 GGACTQ9BVM4 153 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 HES7Q9BYE0 225 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 TCFL5Q9UL49 500 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 CLN5O75503 358 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 MELTFP08582 738 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 CCL20P78556 96 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 IGFBP7Q16270 282 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 ZNF385CQ66K41 422 aaPredicted RBP11.87□□□□□ -0.51
NFKB1-201ENST00000226574 DTD1Q8TEA8 209 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 OR4C12Q96R67 309 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 TMEM9BQ9NQ34 198 aa11.87□□□□□ -0.51
NFKB1-201ENST00000226574 TRGV5A0A0B4J1U4 118 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 IGSF23A1L1A6 192 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 RPL36A-HNRNPH2H7BZ11 118 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 M0R1B8 84 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 ST8SIA5O15466 376 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 CST2P09228 141 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 TRGC1P0CF51 173 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 GAMTQ14353 236 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 TMEM187Q14656 261 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 ZNF718Q3SXZ3 478 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 OIT3Q8WWZ8 545 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 GPR146Q96CH1 333 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 ZNF586Q9NXT0 402 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 KLF13Q9Y2Y9 288 aaPredicted RBP11.86□□□□□ -0.51
NFKB1-201ENST00000226574 CAMPP49913 170 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 C16orf82Q7Z2V1 217 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 FAM173AQ9BQD7 235 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 SRXN1Q9BYN0 137 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 OR51M1Q9H341 326 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 ZNF581Q9P0T4 197 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 IL17BQ9UHF5 180 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 PROB1E7EW31 1015 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 GYPAP02724 150 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 EIF4E3Q8N5X7 224 aaKnown RBP11.86□□□□□ -0.51
NFKB1-201ENST00000226574 PRR14LQ5THK1 2151 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 LAMA2P24043 3122 aaKnown RBP11.86□□□□□ -0.51
NFKB1-201ENST00000226574 HSBP1O75506 76 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 RFPL3SP0C7P2 107 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 BCL2P10415 239 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 HLA-GP17693 338 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 IQCJQ1A5X6 159 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 DPPA3Q6W0C5 159 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 COMMD5Q9GZQ3 224 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 OR1A1Q9P1Q5 309 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 NAT8Q9UHE5 227 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 CARHSP1Q9Y2V2 147 aaKnown RBP11.86□□□□□ -0.51
NFKB1-201ENST00000226574 HS3ST3B1Q9Y662 390 aa11.86□□□□□ -0.51
NFKB1-201ENST00000226574 AMTP48728 403 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 ZNF83P51522 516 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 GNB1P62873 340 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 CFHR5Q9BXR6 569 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 SSUH2Q9Y2M2 353 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 A0A0C4DFX4 3053 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 IGKV3D-11A0A0A0MRZ8 115 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 A0A1B0GV90 55 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 MOB3AQ96BX8 217 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 FAM117AQ9C073 453 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 EFNA2O43921 213 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 NPIPB7O75200 414 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 PTBP3O95758 552 aaKnown RBP11.85□□□□□ -0.51
NFKB1-201ENST00000226574 APELAP0DMC3 54 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 MEOX1P50221 254 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 SUPT4H1P63272 117 aaKnown RBP11.85□□□□□ -0.51
NFKB1-201ENST00000226574 KHDC3LQ587J8 217 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 SGMS2Q8NHU3 365 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 VAMP8Q9BV40 100 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 SLC35D1Q9NTN3 355 aa11.85□□□□□ -0.51
NFKB1-201ENST00000226574 SHISA7A6NL88 538 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 TCAPO15273 167 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 UBE2G1P62253 170 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 FNDC7Q5VTL7 733 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 MRPL54Q6P161 138 aaKnown RBP11.84□□□□□ -0.51
NFKB1-201ENST00000226574 MRGPRGQ86SM5 289 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 NLRC5Q86WI3 1866 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 PGLYRP1O75594 196 aaPredicted RBP11.84□□□□□ -0.51
NFKB1-201ENST00000226574 NDUFB4O95168 129 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 PNRC1Q12796 327 aaPredicted RBP11.84□□□□□ -0.51
NFKB1-201ENST00000226574 RTP5Q14D33 572 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 OR52L2PQ8NGH6 319 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 EDARADDQ8WWZ3 215 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 RBKSQ9H477 322 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 MYOZ1Q9NP98 299 aaPredicted RBP11.84□□□□□ -0.51
NFKB1-201ENST00000226574 ARL2-SNX15V9GYD0 113 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 DMWDQ09019 674 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 TIPARPQ7Z3E1 657 aaKnown RBP11.84□□□□□ -0.51
NFKB1-201ENST00000226574 SLC35E3Q7Z769 313 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 LRRC29Q8WV35 223 aa11.84□□□□□ -0.51
NFKB1-201ENST00000226574 ZNF25P17030 456 aaPredicted RBP11.83□□□□□ -0.52
NFKB1-201ENST00000226574 ADCYAP1P18509 176 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 SMIM21Q3B7S5 101 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 CT55Q8WUE5 264 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 TECTBQ96PL2 329 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 ZNF835Q9Y2P0 537 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 BRCA2P51587 3418 aa11.83□□□□□ -0.52
NFKB1-201ENST00000226574 SUMO1P63165 101 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms