RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 MIXL1Q9H2W2 232 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 METTL1Q9UBP6 276 aaKnown RBP15.94■□□□□ 0.14
CLIP2-201ENST00000223398 U3KQ87 197 aa15.94■□□□□ 0.14
CLIP2-201ENST00000223398 HPXP02790 462 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 FABP4P15090 132 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 SEZ6L2Q6UXD5 910 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 CNOT1A5YKK6 2376 aaKnown RBP15.93■□□□□ 0.14
CLIP2-201ENST00000223398 ICMTO60725 284 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 WNT5AP41221 380 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 NPAS1Q99742 590 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 KLK13Q9UKR3 277 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 IGHV1-69-2A0A0G2JMI3 117 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 CAMPP49913 170 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 RBPMS2Q6ZRY4 209 aaKnown RBP15.93■□□□□ 0.14
CLIP2-201ENST00000223398 SCO1O75880 301 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 SCTP09683 121 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 SLC6A1P30531 599 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 PDLIM4P50479 330 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 SLC25A53Q5H9E4 307 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 C10orf113Q5VZT2 155 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 ATP5SQ99766 215 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 ZNF586Q9NXT0 402 aa15.93■□□□□ 0.14
CLIP2-201ENST00000223398 CHCHD2Q9Y6H1 151 aaPredicted RBP15.93■□□□□ 0.14
CLIP2-201ENST00000223398 IGLV3-19P01714 112 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 HLA-GP17693 338 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 PMCHP20382 165 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 KRTDAPP60985 99 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 NUDT16L1Q9BRJ7 211 aaKnown RBP15.92■□□□□ 0.14
CLIP2-201ENST00000223398 IGKV1D-42A0A075B6H8 117 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 RAMP1O60894 148 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 TMEM50BP56557 158 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 IGLV3-21P80748 117 aaPredicted RBP15.92■□□□□ 0.14
CLIP2-201ENST00000223398 HCP5Q6MZN7 132 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 NFAM1Q8NET5 270 aaPredicted RBP15.92■□□□□ 0.14
CLIP2-201ENST00000223398 WNT5BQ9H1J7 359 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 RCC2Q9P258 522 aaKnown RBP15.92■□□□□ 0.14
CLIP2-201ENST00000223398 CACNA1IQ9P0X4 2223 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 SCN2AQ99250 2005 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 RBBP6Q7Z6E9 1792 aaKnown RBP15.92■□□□□ 0.14
CLIP2-201ENST00000223398 SYNGR3O43761 229 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 ORM1P02763 201 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 CDRT15L2A8MXV6 281 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 OR1L1Q8NH94 360 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 MARS2Q96GW9 593 aaKnown RBP15.92■□□□□ 0.14
CLIP2-201ENST00000223398 NAT8BQ9UHF3 227 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 BRCA1P38398 1863 aaKnown RBP15.92■□□□□ 0.14
CLIP2-201ENST00000223398 DEFA6Q01524 100 aa15.92■□□□□ 0.14
CLIP2-201ENST00000223398 HSBP1O75506 76 aa15.91■□□□□ 0.14
CLIP2-201ENST00000223398 TMEM241Q24JQ0 296 aa15.91■□□□□ 0.14
CLIP2-201ENST00000223398 HOGA1Q86XE5 327 aa15.91■□□□□ 0.14
CLIP2-201ENST00000223398 CTDSPLO15194 276 aa15.91■□□□□ 0.14
CLIP2-201ENST00000223398 SLC35B1P78383 322 aa15.91■□□□□ 0.14
CLIP2-201ENST00000223398 SNX22Q96L94 193 aa15.91■□□□□ 0.14
CLIP2-201ENST00000223398 TRAPPC1Q9Y5R8 145 aa15.91■□□□□ 0.14
CLIP2-201ENST00000223398 LOC105371242A0A075B767 164 aa15.91■□□□□ 0.14
CLIP2-201ENST00000223398 ALX3O95076 343 aa15.91■□□□□ 0.14
CLIP2-201ENST00000223398 RNFT1Q5M7Z0 435 aa15.91■□□□□ 0.14
CLIP2-201ENST00000223398 ZBTB34Q8NCN2 500 aa15.91■□□□□ 0.14
CLIP2-201ENST00000223398 NOL4LQ96MY1 436 aaPredicted RBP15.91■□□□□ 0.14
CLIP2-201ENST00000223398 RPL27AP46776 148 aaKnown RBP15.91■□□□□ 0.14
CLIP2-201ENST00000223398 IRF3Q14653 427 aa15.91■□□□□ 0.14
CLIP2-201ENST00000223398 RNASEKQ6P5S7 137 aaKnown RBP15.91■□□□□ 0.14
CLIP2-201ENST00000223398 V9GYH0 126 aa15.91■□□□□ 0.14
CLIP2-201ENST00000223398 HTR1DP28221 377 aa15.9■□□□□ 0.14
CLIP2-201ENST00000223398 P2RY1P47900 373 aa15.9■□□□□ 0.14
CLIP2-201ENST00000223398 UNQ5815/PRO19632Q6UWF5 114 aa15.9■□□□□ 0.14
CLIP2-201ENST00000223398 OVCH2Q7RTZ1 564 aa15.9■□□□□ 0.14
CLIP2-201ENST00000223398 NEURL1O76050 574 aa15.9■□□□□ 0.14
CLIP2-201ENST00000223398 RAB5AP20339 215 aa15.9■□□□□ 0.14
CLIP2-201ENST00000223398 SOSTQ9BQB4 213 aa15.9■□□□□ 0.14
CLIP2-201ENST00000223398 HOXB1P14653 301 aaPredicted RBP15.9■□□□□ 0.14
CLIP2-201ENST00000223398 AMTP48728 403 aa15.9■□□□□ 0.14
CLIP2-201ENST00000223398 GPX7Q96SL4 187 aaPredicted RBP15.9■□□□□ 0.14
CLIP2-201ENST00000223398 ELOVL5Q9NYP7 299 aa15.9■□□□□ 0.14
CLIP2-201ENST00000223398 CEP250Q9BV73 2442 aa15.9■□□□□ 0.14
CLIP2-201ENST00000223398 TNFSF10P50591 281 aa15.89■□□□□ 0.14
CLIP2-201ENST00000223398 TCL1AP56279 114 aa15.89■□□□□ 0.14
CLIP2-201ENST00000223398 Q6ZT83 130 aa15.89■□□□□ 0.14
CLIP2-201ENST00000223398 SLC25A42Q86VD7 318 aa15.89■□□□□ 0.14
CLIP2-201ENST00000223398 TMEM37Q8WXS4 190 aa15.89■□□□□ 0.14
CLIP2-201ENST00000223398 MS4A10Q96PG2 267 aa15.89■□□□□ 0.14
CLIP2-201ENST00000223398 MARVELD1Q9BSK0 173 aa15.89■□□□□ 0.14
CLIP2-201ENST00000223398 TLNRD1Q9H1K6 362 aa15.89■□□□□ 0.14
CLIP2-201ENST00000223398 GALR1P47211 349 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 RNF2Q99496 336 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 AUP1Q9Y679 476 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 TGFBR3LH3BV60 316 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 RAG2P55895 527 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 RPL30P62888 115 aaKnown RBP15.89■□□□□ 0.13
CLIP2-201ENST00000223398 AANATQ16613 207 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 RIPPLY2Q5TAB7 128 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 DGAT2L7PQ6IED9 249 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 C16orf82Q7Z2V1 217 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 GCSAMQ8N6F7 178 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 MIOXQ9UGB7 285 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 CKAP5Q14008 2032 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 B2MP61769 119 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 HOXA4Q00056 320 aaPredicted RBP15.89■□□□□ 0.13
CLIP2-201ENST00000223398 MOGAT2Q3SYC2 334 aa15.89■□□□□ 0.13
CLIP2-201ENST00000223398 ZNF552Q9H707 407 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms