RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 LINC00299Q6ZSB3 139 aa13.4□□□□□ -0.26
LIM2-201ENST00000221973 PDZD9Q8IXQ8 264 aa13.4□□□□□ -0.26
LIM2-201ENST00000221973 BEST4Q8NFU0 473 aa13.4□□□□□ -0.26
LIM2-201ENST00000221973 GALMQ96C23 342 aa13.4□□□□□ -0.26
LIM2-201ENST00000221973 HAX1O00165 279 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 F2RL2O00254 374 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 RBBP9O75884 186 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 COX7A1P24310 79 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 PTBP1P26599 531 aaKnown RBP eCLIP13.39□□□□□ -0.27
LIM2-201ENST00000221973 IGSF11Q5DX21 431 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 UTF1Q5T230 341 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 FAM53AQ6NSI3 398 aaPredicted RBP13.39□□□□□ -0.27
LIM2-201ENST00000221973 Q6ZS49 121 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 MFSD4AQ8N468 514 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 OR10A7Q8NGE5 316 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 OR52L2PQ8NGH6 319 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 OR4A4PQ8NGN8 299 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 SMIM4Q8WVI0 70 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 SNAPC3Q92966 411 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 LEAP2Q969E1 77 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 LHX4Q969G2 390 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 UPRTQ96BW1 309 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 AKIP1Q9NQ31 210 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 OR2S2Q9NQN1 319 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 ANAPC10Q9UM13 185 aa13.39□□□□□ -0.27
LIM2-201ENST00000221973 IGHV3OR16-10A0A075B7F0 116 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 IGKV1-6A0A0C4DH72 117 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 BET1O15155 118 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 GSTZ1O43708 216 aaPredicted RBP13.38□□□□□ -0.27
LIM2-201ENST00000221973 IGHV3-7P01780 117 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 RCVRNP35243 200 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 ARPC4P59998 168 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 ZNF45Q02386 682 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 GNMTQ14749 295 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 HERPUD1Q15011 391 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 Q8N402 240 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 OR10V1Q8NGI7 309 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 TNFRSF14Q92956 283 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 SRRQ9GZT4 340 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 TMEM133Q9H2Q1 129 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 HEXA-AS1Q9H8Q6 139 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 UNKLQ9H9P5 680 aaKnown RBP13.38□□□□□ -0.27
LIM2-201ENST00000221973 GNG12Q9UBI6 72 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 MTFP1Q9UDX5 166 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 ANXA10Q9UJ72 324 aa13.38□□□□□ -0.27
LIM2-201ENST00000221973 A0A0A6YYJ9 748 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 A0A1W2PRD5 423 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 A0A1W2PRF3 423 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 A0A1W2PRM7 423 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 RNASEK-C17orf49H0YIS7 233 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 NAT1P18440 290 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 HLA-DMAP28067 261 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 LOXL3P58215 753 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 HTD2P86397 168 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 NCR3LG1Q68D85 454 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 HCP5Q6MZN7 132 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 PNKDQ8N490 385 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 OR52M1Q8NGK5 317 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 OR13D1Q8NGV5 346 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 S100ZQ8WXG8 99 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 OCEL1Q9H607 264 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 GFOD1Q9NXC2 390 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 OR1A1Q9P1Q5 309 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 SLC23A1Q9UHI7 598 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 WNK2Q9Y3S1 2297 aa13.37□□□□□ -0.27
LIM2-201ENST00000221973 DOCK11Q5JSL3 2073 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 TRAV40A0A0B4J280 105 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 CENPVL3A0A0U1RRI6 287 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 HSPA12AO43301 675 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 LANCL1O43813 399 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 IGHV4-38-2P0DP08 117 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 PPP1CCP36873 323 aaKnown RBP13.36□□□□□ -0.27
LIM2-201ENST00000221973 GNG10P50151 68 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 ACTBP60709 375 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 ACTG1P63261 375 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 TMEM30BQ3MIR4 351 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 STEAP3Q658P3 488 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 LYSMD2Q8IV50 215 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 ABHD12Q8N2K0 398 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 ZFAND2BQ8WV99 257 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 THAP7Q9BT49 309 aaPredicted RBP13.36□□□□□ -0.27
LIM2-201ENST00000221973 CABLES2Q9BTV7 478 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 JPT1Q9UK76 154 aa13.36□□□□□ -0.27
LIM2-201ENST00000221973 A0A087X0M5 115 aa13.35□□□□□ -0.27
LIM2-201ENST00000221973 IGHV2-26A0A0B4J1V2 119 aa13.35□□□□□ -0.27
LIM2-201ENST00000221973 A0A1B0GX30 115 aa13.35□□□□□ -0.27
LIM2-201ENST00000221973 PMP2P02689 132 aa13.35□□□□□ -0.27
LIM2-201ENST00000221973 ZBTB25P24278 435 aa13.35□□□□□ -0.27
LIM2-201ENST00000221973 CEACAM6P40199 344 aa13.35□□□□□ -0.27
LIM2-201ENST00000221973 OR3A3P47888 321 aa13.35□□□□□ -0.27
LIM2-201ENST00000221973 MORN2Q502X0 79 aa13.35□□□□□ -0.27
LIM2-201ENST00000221973 KLF17Q5JT82 389 aaPredicted RBP13.35□□□□□ -0.27
LIM2-201ENST00000221973 GPR157Q5UAW9 335 aa13.35□□□□□ -0.27
LIM2-201ENST00000221973 GDPD1Q8N9F7 314 aa13.35□□□□□ -0.27
LIM2-201ENST00000221973 OR5AP2Q8NGF4 316 aa13.35□□□□□ -0.27
LIM2-201ENST00000221973 OR5H2Q8NGV7 314 aa13.35□□□□□ -0.27
LIM2-201ENST00000221973 OR10J5Q8NHC4 309 aa13.35□□□□□ -0.27
LIM2-201ENST00000221973 SDHCQ99643 169 aaPredicted RBP13.35□□□□□ -0.27
LIM2-201ENST00000221973 GINS4Q9BRT9 223 aa13.35□□□□□ -0.27
LIM2-201ENST00000221973 CLEC7AQ9BXN2 247 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms