RNA–Protein interactions for RNA: ENST00000219689.11

USP31-201, Transcript of ubiquitin specific peptidase 31, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP31, Length 10,699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP31-201ENST00000219689 ZNF665Q9H7R5 613 aa9.77□□□□□ -0.85
USP31-201ENST00000219689 LINC00614P0C842 121 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 GFI1BQ5VTD9 330 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 OR4C13Q8NGP0 309 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 C7orf71A4D174 169 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 RAMP1O60894 148 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 PAQR9Q6ZVX9 377 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 C4orf45Q96LM5 186 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 MMP17Q9ULZ9 603 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 LAMTOR2Q9Y2Q5 125 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 KBTBD11O94819 623 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 SMOC1Q9H4F8 434 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 NCOR2Q9Y618 2525 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 IGKV6-21A0A0C4DH24 114 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 NOGQ13253 232 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 FXYD3Q14802 87 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 CLLU1OSQ5K130 101 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 KLHDC9Q8NEP7 349 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 LSM10Q969L4 123 aaKnown RBP9.76□□□□□ -0.85
USP31-201ENST00000219689 NGBQ9NPG2 151 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 COL10A1Q03692 680 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 C8orf82Q6P1X6 216 aaPredicted RBP9.76□□□□□ -0.85
USP31-201ENST00000219689 ANKRD37Q7Z713 158 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 GBGT1Q8N5D6 347 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 HDHD3Q9BSH5 251 aaPredicted RBP9.76□□□□□ -0.85
USP31-201ENST00000219689 NUP210Q8TEM1 1887 aaPredicted RBP9.76□□□□□ -0.85
USP31-201ENST00000219689 GAPDHP04406 335 aaKnown RBP9.76□□□□□ -0.85
USP31-201ENST00000219689 MEF2BQ02080 365 aaPredicted RBP9.76□□□□□ -0.85
USP31-201ENST00000219689 CST9Q5W186 159 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 CD300LDQ6UXZ3 194 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 SLC25A43Q8WUT9 341 aaPredicted RBP9.76□□□□□ -0.85
USP31-201ENST00000219689 MRGPRFQ96AM1 343 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 DLEU1O43261 78 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 EIF3IQ13347 325 aaKnown RBP9.76□□□□□ -0.85
USP31-201ENST00000219689 TMEM95Q3KNT9 176 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 TMEM91Q6ZNR0 172 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 ISXQ2M1V0 245 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 DEFB133Q30KQ1 61 aa9.76□□□□□ -0.85
USP31-201ENST00000219689 TRAV8-7A0A075B6U6 113 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 ZNF716A6NP11 495 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 CD46P15529 392 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 LYZP61626 148 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 SLC52A3Q9NQ40 469 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 COL2A1P02458 1487 aaPredicted RBP9.75□□□□□ -0.85
USP31-201ENST00000219689 ANKHD1Q8IWZ3 2542 aaKnown RBP9.75□□□□□ -0.85
USP31-201ENST00000219689 COX6CP09669 75 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 SRSF3P84103 164 aaKnown RBP9.75□□□□□ -0.85
USP31-201ENST00000219689 SPRYD7Q5W111 196 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 TMEM56Q96MV1 263 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 PSG11Q9UQ72 335 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 NOTCH2Q04721 2471 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 OR2T8A6NH00 312 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 ZFAND6Q6FIF0 208 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 OR5A1Q8NGJ0 315 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 Q8WTZ3 238 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 TIMM10BQ9Y5J6 103 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 WNT5AP41221 380 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 ANKRD55Q3KP44 614 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 C11orf40Q8WZ69 217 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 MRGPRX4Q96LA9 322 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 NCOR1P1Q9H4R4 102 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 MRM2Q9UI43 246 aaKnown RBP9.75□□□□□ -0.85
USP31-201ENST00000219689 COL22A1Q8NFW1 1626 aaPredicted RBP9.75□□□□□ -0.85
USP31-201ENST00000219689 PPIAL4DF5H284 164 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 GCM2O75603 506 aaPredicted RBP9.75□□□□□ -0.85
USP31-201ENST00000219689 SPATA46Q5T0L3 261 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 TUSC5Q8IXB3 177 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 ANKRD10Q9NXR5 420 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 CDC42EP2O14613 210 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 ACP1P24666 158 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 METAP1P53582 386 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 CA13Q8N1Q1 262 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 PP6455Q8WZ26 134 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 NEU1Q99519 415 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.75□□□□□ -0.85
USP31-201ENST00000219689 ZNF107Q9UII5 783 aaPredicted RBP9.75□□□□□ -0.85
USP31-201ENST00000219689 GOSR1O95249 250 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 FAM157BP0CG42 384 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 ZNF774Q6NX45 483 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.75□□□□□ -0.85
USP31-201ENST00000219689 WDR54Q9H977 334 aa9.75□□□□□ -0.85
USP31-201ENST00000219689 TMSB15BA0A087X1C1 80 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 C1QTNF9BB2RNN3 333 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 TSPAN2O60636 221 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 MGPP08493 103 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 ROM1Q03395 351 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 HIKESHIQ53FT3 197 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 MESTQ5EB52 335 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 GAPTQ8N292 157 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 SELENOKQ9Y6D0 94 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 GPX4P36969 197 aaPredicted RBP9.74□□□□□ -0.85
USP31-201ENST00000219689 CISD1Q9NZ45 108 aaKnown RBP9.74□□□□□ -0.85
USP31-201ENST00000219689 IL36RNQ9UBH0 155 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 ANXA10Q9UJ72 324 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 KLF4O43474 513 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 MPZL1O95297 269 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 FMODQ06828 376 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 PKIBQ9C010 78 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 ZBP1Q9H171 429 aa9.74□□□□□ -0.85
USP31-201ENST00000219689 CLN8Q9UBY8 286 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms