RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CYB5BO43169 146 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 IGKV1-39P01597 117 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 IGKV1D-39P04432 117 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 CD200P41217 278 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 CLDN18P56856 261 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 RAB11AP62491 216 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 LINC00596Q86U02 117 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 FAM58AQ8N1B3 248 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 OR10V1Q8NGI7 309 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 SCGB1C1Q8TD33 95 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 HES7Q9BYE0 225 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 RPRMQ9NS64 109 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 DLL3Q9NYJ7 618 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 CACNG5Q9UF02 275 aa14.68□□□□□ -0.06
USB1-201ENST00000219281 TRBV6-6A0A0A6YYG2 114 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 TRAV1-1A0A0B4J248 108 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 CXorf65A6NEN9 183 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 ANKRD30BLA7E2S9 258 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 SYNGR4O95473 234 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 SLC25A6P12236 298 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 LCN15Q6UWW0 184 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 OR2M7Q8NG81 312 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 TTC28Q96AY4 2481 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 FAM166BA8MTA8 275 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 RHBDL1O75783 438 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 METTL15P1P0C7V9 234 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 ARL16Q0P5N6 197 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 ZNF880Q6PDB4 577 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 SPNS3Q6ZMD2 512 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 PRR18Q8N4B5 295 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 CABLES2Q9BTV7 478 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 BCL2L14Q9BZR8 327 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 ZNF665Q9H7R5 613 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 ZNF703Q9H7S9 590 aaPredicted RBP14.67□□□□□ -0.06
USB1-201ENST00000219281 PSENENQ9NZ42 101 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 PPP1R3CQ9UQK1 317 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 FREM1Q5H8C1 2179 aa14.67□□□□□ -0.06
USB1-201ENST00000219281 SYNGR2O43760 224 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 ARR3P36575 388 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 FGF8P55075 233 aaPredicted RBP14.66□□□□□ -0.06
USB1-201ENST00000219281 FAM90A2PQ658T7 463 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 ZNF787Q6DD87 383 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 ZNF573Q86YE8 665 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 APH1AQ96BI3 265 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 FAM173AQ9BQD7 235 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 ZMAT5Q9UDW3 170 aaKnown RBP14.66□□□□□ -0.06
USB1-201ENST00000219281 DEGS1O15121 323 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 HIST1H2BKO60814 126 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 IGLV2-14P01704 120 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 TRGC2P03986 189 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 HIST1H2BJP06899 126 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 RD3LP0DJH9 198 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 ZNF16P17020 682 aaPredicted RBP14.66□□□□□ -0.06
USB1-201ENST00000219281 HIST1H2BOP23527 126 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 HIST1H2BBP33778 126 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 HIST1H2BDP58876 126 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 HIST1H2BCP62807 126 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 GNG3P63215 75 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 PLP2Q04941 152 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 ZNF726P1Q15940 193 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 HIST2H2BEQ16778 126 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.66□□□□□ -0.06
USB1-201ENST00000219281 SSX7Q7RTT5 188 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 OR10G4Q8NGN3 311 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 HIST1H2BHQ93079 126 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 HIST1H2BNQ99877 126 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 HIST1H2BMQ99879 126 aa14.66□□□□□ -0.06
USB1-201ENST00000219281 RYDENQ9NUL5 291 aaKnown RBP14.66□□□□□ -0.06
USB1-201ENST00000219281 CISD1Q9NZ45 108 aaKnown RBP14.66□□□□□ -0.06
USB1-201ENST00000219281 NEURL1O76050 574 aa14.65□□□□□ -0.06
USB1-201ENST00000219281 CA6P23280 308 aa14.65□□□□□ -0.06
USB1-201ENST00000219281 S100A2P29034 98 aa14.65□□□□□ -0.06
USB1-201ENST00000219281 WNT5AP41221 380 aa14.65□□□□□ -0.06
USB1-201ENST00000219281 MAGEA5P43359 124 aa14.65□□□□□ -0.06
USB1-201ENST00000219281 PYY3Q5JQD4 70 aa14.65□□□□□ -0.06
USB1-201ENST00000219281 UBALD1Q8TB05 177 aa14.65□□□□□ -0.06
USB1-201ENST00000219281 MT-CO3P00414 261 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 IGKV1-5P01602 117 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 BCL2P10415 239 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 OR2T2Q6IF00 324 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 FAM180AQ6UWF9 173 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 LURAP1LQ8IV03 231 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 ZNF525Q8N782 197 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 LSM10Q969L4 123 aaKnown RBP14.64□□□□□ -0.07
USB1-201ENST00000219281 GAR1Q9NY12 217 aaKnown RBP14.64□□□□□ -0.07
USB1-201ENST00000219281 TINAGQ9UJW2 476 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 RBM7Q9Y580 266 aaKnown RBP14.64□□□□□ -0.07
USB1-201ENST00000219281 MPC1Q9Y5U8 109 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 TNRC6AQ8NDV7 1962 aaKnown RBP14.64□□□□□ -0.07
USB1-201ENST00000219281 B4DEV8 164 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 TESK1Q15569 626 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 DHRS13Q6UX07 377 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 NUFIP2Q7Z417 695 aaKnown RBP14.64□□□□□ -0.07
USB1-201ENST00000219281 HAPLN4Q86UW8 402 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 B4GALT7Q9UBV7 327 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 KCNS2Q9ULS6 477 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 PCNX2A6NKB5 2137 aa14.64□□□□□ -0.07
USB1-201ENST00000219281 PIGBOS1A0A0B4J2F0 54 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 OR5B21A6NL26 309 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 APLNRP35414 380 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms