RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 UCP3P55916 312 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 ZNF672Q499Z4 452 aaPredicted RBP16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 PRR18Q8N4B5 295 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 IL1F10Q8WWZ1 152 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 EGLN1Q9GZT9 426 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 RAB18Q9NP72 206 aa16.45■□□□□ 0.22
TNFRSF1A-201ENST00000162749 USF3Q68DE3 2245 aa16.44■□□□□ 0.22
TNFRSF1A-201ENST00000162749 KANTRA0A1W2PQU2 76 aa16.44■□□□□ 0.22
TNFRSF1A-201ENST00000162749 PIGPP57054 158 aa16.44■□□□□ 0.22
TNFRSF1A-201ENST00000162749 HMGN3Q15651 99 aa16.44■□□□□ 0.22
TNFRSF1A-201ENST00000162749 KRBOX4Q5JUW0 171 aa16.44■□□□□ 0.22
TNFRSF1A-201ENST00000162749 TPRX1Q8N7U7 411 aa16.44■□□□□ 0.22
TNFRSF1A-201ENST00000162749 ZNRF1Q8ND25 227 aa16.44■□□□□ 0.22
TNFRSF1A-201ENST00000162749 NARFLQ9H6Q4 476 aa16.44■□□□□ 0.22
TNFRSF1A-201ENST00000162749 TAF9BQ9HBM6 251 aa16.44■□□□□ 0.22
TNFRSF1A-201ENST00000162749 H0YIZ8 118 aa16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 DIRAS3O95661 229 aa16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 IRF2P14316 349 aa16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 GLIPR1P48060 266 aa16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 LUMP51884 338 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 SWI5Q1ZZU3 235 aa16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 MUC15Q8N387 334 aa16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 OR10J5Q8NHC4 309 aa16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 UBALD1Q8TB05 177 aa16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 SLC2A9Q9NRM0 540 aa16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 B8ZZF3 427 aa16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 STUMQ69YW2 141 aa16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 LRRC20Q8TCA0 184 aa16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 BBC3Q96PG8 261 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 DOCK11Q5JSL3 2073 aa16.43■□□□□ 0.22
TNFRSF1A-201ENST00000162749 CRYM-AS1A6NIL9 109 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 NPIPB11E5RHQ5 1161 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 TEX46H3BTG2 121 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 SCO1O75880 301 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 CYCSP99999 105 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 PDZD9Q8IXQ8 264 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 OR10C1Q96KK4 312 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 SNX22Q96L94 193 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 RSRP1Q9BUV0 290 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 OR1A1Q9P1Q5 309 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 AKAP6Q13023 2319 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 IGKV1D-13A0A0B4J2D9 117 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 LRRC30A6NM36 301 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 K7N7A8 449 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 IGKV1-13P0DP09 117 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 ABCA11PQ4W5N1 156 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 PHLDA2Q53GA4 152 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 FAM74A1Q5RGS3 127 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 TEX36Q5VZQ5 186 aa16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 H1FOOQ8IZA3 346 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF1A-201ENST00000162749 OOEPA6NGQ2 149 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 C12orf77C9JDV5 145 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 MUC1P15941 1255 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 GNRHRP30968 328 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 EDDM3AQ14507 147 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 SGPP2Q8IWX5 399 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 INO80EQ8NBZ0 244 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 DEFB108BQ8NET1 73 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 SECTM1Q8WVN6 248 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 RTN4IP1Q8WWV3 396 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 RRNAD1Q96FB5 475 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 ZNF471Q9BX82 626 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 SLC25A32Q9H2D1 315 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 OR2W1Q9Y3N9 320 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 MGST3O14880 152 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 IL15RAQ13261 267 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 LDLRAD3Q86YD5 345 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 PPP1R35Q8TAP8 253 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 MRGPRDQ8TDS7 321 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 SDSLQ96GA7 329 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 KCNIP1Q9NZI2 227 aa16.41■□□□□ 0.22
TNFRSF1A-201ENST00000162749 TEX13DA0A0J9YY54 714 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 A0A1B0GW55 424 aa16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 DUX4L2P0CJ85 424 aa16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 DUX4L3P0CJ86 424 aa16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 DUX4L4P0CJ87 422 aa16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 DUX4L5P0CJ88 424 aa16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 DUX4L6P0CJ89 424 aa16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 DUX4L7P0CJ90 424 aa16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 SELLP14151 372 aa16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 DUX4L9Q6RFH8 374 aaPredicted RBP16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 ZNF561Q8N587 486 aa16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 OR13A1Q8NGR1 328 aa16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 DCUN1D4Q92564 292 aa16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 LINC00052Q96N35 136 aa16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 DUX4Q9UBX2 424 aa16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 PFDN2Q9UHV9 154 aa16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 YLPM1P49750 1951 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1A-201ENST00000162749 A8MXK9 166 aa16.39■□□□□ 0.22
TNFRSF1A-201ENST00000162749 IFNA2P01563 188 aa16.39■□□□□ 0.22
TNFRSF1A-201ENST00000162749 PRB1P04280 392 aa16.39■□□□□ 0.22
TNFRSF1A-201ENST00000162749 CCL17Q92583 94 aa16.39■□□□□ 0.22
TNFRSF1A-201ENST00000162749 MEX3AA1L020 520 aaKnown RBP16.39■□□□□ 0.21
TNFRSF1A-201ENST00000162749 TMEM178BH3BS89 294 aa16.39■□□□□ 0.21
TNFRSF1A-201ENST00000162749 HSPA12AO43301 675 aa16.39■□□□□ 0.21
TNFRSF1A-201ENST00000162749 GYPAP02724 150 aa16.39■□□□□ 0.21
TNFRSF1A-201ENST00000162749 HEXAP06865 529 aa16.39■□□□□ 0.21
TNFRSF1A-201ENST00000162749 FGF2P09038 288 aa16.39■□□□□ 0.21
TNFRSF1A-201ENST00000162749 ZNF788Q6ZQV5 615 aa16.39■□□□□ 0.21
TNFRSF1A-201ENST00000162749 ZNF818PQ6ZRF7 136 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms