RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 LRFN1Q9P244 771 aa14.11□□□□□ -0.15
HNRNPU-228ENST00000640306 DSPP15924 2871 aaKnown RBP14.11□□□□□ -0.15
HNRNPU-228ENST00000640306 F2RP25116 425 aa14.11□□□□□ -0.15
HNRNPU-228ENST00000640306 RAB2AP61019 212 aa14.11□□□□□ -0.15
HNRNPU-228ENST00000640306 CEACAM21Q3KPI0 293 aa14.11□□□□□ -0.15
HNRNPU-228ENST00000640306 GNPNAT1Q96EK6 184 aaPredicted RBP14.11□□□□□ -0.15
HNRNPU-228ENST00000640306 HIST1H2AAQ96QV6 131 aa14.11□□□□□ -0.15
HNRNPU-228ENST00000640306 TMPRSS5Q9H3S3 457 aa14.11□□□□□ -0.15
HNRNPU-228ENST00000640306 CACNG5Q9UF02 275 aa14.11□□□□□ -0.15
HNRNPU-228ENST00000640306 TUSC2O75896 110 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 HOXA6P31267 233 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 ZNF295-AS1Q8N0V1 137 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 OR10J5Q8NHC4 309 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 MRPL30Q8TCC3 161 aaKnown RBP14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 TVP23CQ96ET8 276 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 RPRMQ9NS64 109 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 KIR2DS1A0A191URI9 304 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 A0A1B0GW64 132 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 KIR2DS4P43632 304 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 GFRA1P56159 465 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 TLE4Q04727 773 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 KIR2DS1Q14954 304 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 PYY3Q5JQD4 70 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 TCEAL6Q6IPX3 200 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 UNKLQ9H9P5 680 aaKnown RBP14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 KCNS2Q9ULS6 477 aa14.1□□□□□ -0.15
HNRNPU-228ENST00000640306 CHD3Q12873 2000 aaKnown RBP14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 HMGB3O15347 200 aaKnown RBP14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 IFNA5P01569 189 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 CYC1P08574 325 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 ELLP55199 621 aaPredicted RBP14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 TAS2R30P59541 319 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 ZFP36L1Q07352 338 aaKnown RBP14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 ARL16Q0P5N6 197 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 COLCA1Q6ZS62 124 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 SSX7Q7RTT5 188 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 TIPARPQ7Z3E1 657 aaKnown RBP14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 MED12LQ86YW9 2145 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 TRAV24A0A0B4J272 114 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 CD300LBA8K4G0 201 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 NTN3O00634 580 aaPredicted RBP14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 S100PP25815 95 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 OR2T2Q6IF00 324 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 THOC3Q96J01 351 aaKnown RBP14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 TECTBQ96PL2 329 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 IER2Q9BTL4 223 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 C12orf49Q9H741 205 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 PLA2G3Q9NZ20 509 aa14.09□□□□□ -0.15
HNRNPU-228ENST00000640306 A0A1W2PR80 420 aa14.08□□□□□ -0.15
HNRNPU-228ENST00000640306 H0Y980 276 aa14.08□□□□□ -0.15
HNRNPU-228ENST00000640306 CA6P23280 308 aa14.08□□□□□ -0.15
HNRNPU-228ENST00000640306 FOXO1Q12778 655 aa14.08□□□□□ -0.15
HNRNPU-228ENST00000640306 ZNF506Q5JVG8 444 aa14.08□□□□□ -0.15
HNRNPU-228ENST00000640306 ZNF610Q8N9Z0 462 aa14.08□□□□□ -0.15
HNRNPU-228ENST00000640306 OR5D13Q8NGL4 314 aa14.08□□□□□ -0.15
HNRNPU-228ENST00000640306 WDR1O75083 606 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 IGHV2-70P01814 119 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 HOXA5P20719 270 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 CD200P41217 278 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 RPS16P62249 146 aaKnown RBP14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 BAXQ07812 192 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 OR10D4PQ8NGN7 298 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 OR2W1Q9Y3N9 320 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 GTF3C1Q12789 2109 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 DOCK11Q5JSL3 2073 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 M0R296 226 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 SIRPB1O00241 398 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 HIST1H2BKO60814 126 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 IGKV1-39P01597 117 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 IGKV1D-39P04432 117 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 HSPB1P04792 205 aaKnown RBP14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 HIST1H2BJP06899 126 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 SELEP16581 610 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 HIST1H2BOP23527 126 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 HIST1H2BBP33778 126 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 MAGEA5P43359 124 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 HIST1H2BDP58876 126 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 HIST1H2BCP62807 126 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 HOXA4Q00056 320 aaPredicted RBP14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 IL24Q13007 206 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 HIST2H2BEQ16778 126 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 CT55Q8WUE5 264 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 HIST1H2BHQ93079 126 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 HIST1H2BNQ99877 126 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 HIST1H2BMQ99879 126 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 SSX3Q99909 188 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 GPR61Q9BZJ8 451 aa14.08□□□□□ -0.16
HNRNPU-228ENST00000640306 BTBD17A6NE02 478 aa14.07□□□□□ -0.16
HNRNPU-228ENST00000640306 S100A2P29034 98 aa14.07□□□□□ -0.16
HNRNPU-228ENST00000640306 OR2B11Q5JQS5 317 aa14.07□□□□□ -0.16
HNRNPU-228ENST00000640306 ZNF787Q6DD87 383 aa14.07□□□□□ -0.16
HNRNPU-228ENST00000640306 BEND4Q6ZU67 534 aa14.07□□□□□ -0.16
HNRNPU-228ENST00000640306 PLK3Q9H4B4 646 aa14.07□□□□□ -0.16
HNRNPU-228ENST00000640306 HLA-DRB3P79483 266 aa14.07□□□□□ -0.16
HNRNPU-228ENST00000640306 SPANXN5Q5MJ07 72 aa14.07□□□□□ -0.16
HNRNPU-228ENST00000640306 ZNF324BQ6AW86 544 aaPredicted RBP14.07□□□□□ -0.16
HNRNPU-228ENST00000640306 ZNF880Q6PDB4 577 aa14.07□□□□□ -0.16
HNRNPU-228ENST00000640306 LINC00696Q6ZRV3 163 aa14.07□□□□□ -0.16
HNRNPU-228ENST00000640306 SCGB1C1Q8TD33 95 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms