RNA–Protein interactions for RNA: ENST00000638372.1

SCARB2-208, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-208ENST00000638372 C19orf57Q0VDD7 668 aa12.44□□□□□ -0.42
SCARB2-208ENST00000638372 AARDQ4LEZ3 155 aa12.44□□□□□ -0.42
SCARB2-208ENST00000638372 OR11H4Q8NGC9 324 aa12.44□□□□□ -0.42
SCARB2-208ENST00000638372 ZDHHC11Q9H8X9 412 aa12.44□□□□□ -0.42
SCARB2-208ENST00000638372 GPR132Q9UNW8 380 aa12.44□□□□□ -0.42
SCARB2-208ENST00000638372 POMT1Q9Y6A1 747 aa12.44□□□□□ -0.42
SCARB2-208ENST00000638372 C20orf202A1L168 122 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 NHLH2Q02577 135 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 ARL16Q0P5N6 197 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 OR4A4PQ8NGN8 299 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 ADAMTS17Q8TE56 1095 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 LOXL4Q96JB6 756 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 CA11O75493 328 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 F2RP25116 425 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 ZNF362Q5T0B9 420 aaPredicted RBP12.43□□□□□ -0.42
SCARB2-208ENST00000638372 TIPARPQ7Z3E1 657 aaKnown RBP12.43□□□□□ -0.42
SCARB2-208ENST00000638372 TMEM147Q9BVK8 224 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 OR5AC2Q9NZP5 309 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 CHEK1O14757 476 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 CFDP00746 253 aaPredicted RBP12.43□□□□□ -0.42
SCARB2-208ENST00000638372 FGF12P61328 243 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 CBLN2Q8IUK8 224 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 SSMEM1Q8WWF3 244 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 FGF11Q92914 225 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 BARX1Q9HBU1 254 aaPredicted RBP12.43□□□□□ -0.42
SCARB2-208ENST00000638372 TP53BP1Q12888 1972 aaPredicted RBP12.43□□□□□ -0.42
SCARB2-208ENST00000638372 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.43□□□□□ -0.422e-8■■■□□ 17.7
SCARB2-208ENST00000638372 CHRNA7P36544 502 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 CD200P41217 278 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 TMEM50BP56557 158 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 RTN4RQ9BZR6 473 aa12.43□□□□□ -0.42
SCARB2-208ENST00000638372 VWA8A3KMH1 1905 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 RBFOX3A6NFN3 312 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 CNN1P51911 297 aaKnown RBP12.42□□□□□ -0.42
SCARB2-208ENST00000638372 ZNF658BQ4V348 819 aaPredicted RBP12.42□□□□□ -0.42
SCARB2-208ENST00000638372 C12orf57Q99622 126 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 SHANK1Q9Y566 2161 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 PRSS44E7EML9 344 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 CLDN34H7C241 214 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 ADRA2AP08913 450 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 CELA3AP09093 270 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 PRF1P14222 555 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 H2BFSP57053 126 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 CTRB1P17538 263 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 TMEM241Q24JQ0 296 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 CTRB2Q6GPI1 263 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 FDX2Q6P4F2 183 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 C19orf48Q6RUI8 117 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 FAM103A1Q9BTL3 118 aaKnown RBP12.42□□□□□ -0.42
SCARB2-208ENST00000638372 Q9N2K0 584 aa12.42□□□□□ -0.42
SCARB2-208ENST00000638372 NPBWR2P48146 333 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 ZNF66Q6ZN08 573 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 OR2T6Q8NHC8 308 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 ATP5SQ99766 215 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 CLCF1Q9UBD9 225 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 EP400Q96L91 3159 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 FER1L5A0AVI2 2057 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 PRR7Q8TB68 274 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 AQP3Q92482 292 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 WNT5BQ9H1J7 359 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 PRDX2P32119 198 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 SIGLEC12Q96PQ1 595 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 TXN2Q99757 166 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 A0A0G2JMZ2 1700 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 LRRC37A2A6NM11 1700 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 A0A087WV48 116 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 RUNX1Q01196 453 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 FNDC7Q5VTL7 733 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 NR2C2APQ86WQ0 139 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 RAB1CQ92928 201 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 NPDC1Q9NQX5 325 aaPredicted RBP12.41□□□□□ -0.42
SCARB2-208ENST00000638372 TIMM9Q9Y5J7 89 aa12.41□□□□□ -0.42
SCARB2-208ENST00000638372 ZFHX2Q9C0A1 2572 aaPredicted RBP12.41□□□□□ -0.42
SCARB2-208ENST00000638372 ORM2P19652 201 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 ATP6V0CP27449 155 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 CEBPDP49716 269 aaPredicted RBP12.4□□□□□ -0.42
SCARB2-208ENST00000638372 P2RY4P51582 365 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 COL10A1Q03692 680 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 TUSC1Q2TAM9 212 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 ABHD14BQ96IU4 210 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 HSD17B10Q99714 261 aaKnown RBP12.4□□□□□ -0.42
SCARB2-208ENST00000638372 ZNF407Q9C0G0 2248 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 A0A0G2JK05 382 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 DHRS7CA6NNS2 312 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 C1QL1O75973 258 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 CLDN14O95500 239 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 APELAP0DMC3 54 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 HLA-GP17693 338 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 REG1BP48304 166 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 SNRPEP62304 92 aaKnown RBP12.4□□□□□ -0.42
SCARB2-208ENST00000638372 AWAT1Q58HT5 328 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 LINC00114Q6XXX2 140 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 LINC00862A6NCI5 91 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 NMBP08949 121 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 SULT1A1P50225 295 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 TNXAQ16473 311 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 ADTRPQ96IZ2 230 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 TRPM7Q96QT4 1865 aa12.4□□□□□ -0.42
SCARB2-208ENST00000638372 RHOBP62745 196 aa12.4□□□□□ -0.43
SCARB2-208ENST00000638372 C1QL2Q7Z5L3 287 aa12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms