RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 OR5H1A6NKK0 313 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 A6NLC8 198 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 PSPNO60542 156 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 TUBG1P23258 451 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 GCH1P30793 250 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 PJVKQ0ZLH3 352 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 TESK1Q15569 626 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 ZNF718Q3SXZ3 478 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 CXorf66Q5JRM2 361 aaPredicted RBP18.16■□□□□ 0.5
CLN6-224ENST00000638076 PRAMEF6Q5VXH4 476 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 IL22RA2Q969J5 263 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 ARV1Q9H2C2 271 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 TUBG2Q9NRH3 451 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 WIPI2Q9Y4P8 454 aa18.16■□□□□ 0.5
CLN6-224ENST00000638076 CLEC18AA5D8T8 446 aa18.15■□□□□ 0.5
CLN6-224ENST00000638076 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.15■□□□□ 0.5
CLN6-224ENST00000638076 EIF2S3P41091 472 aaKnown RBP18.15■□□□□ 0.5
CLN6-224ENST00000638076 OR2C3Q8N628 320 aa18.15■□□□□ 0.5
CLN6-224ENST00000638076 CLEC18CQ8NCF0 446 aa18.15■□□□□ 0.5
CLN6-224ENST00000638076 MAGT1Q9H0U3 335 aa18.15■□□□□ 0.5
CLN6-224ENST00000638076 SVILO95425 2214 aa18.15■□□□□ 0.5
CLN6-224ENST00000638076 KLK10O43240 276 aa18.15■□□□□ 0.5
CLN6-224ENST00000638076 SSSCA1O60232 199 aa18.15■□□□□ 0.5
CLN6-224ENST00000638076 IGLV2-14P01704 120 aa18.15■□□□□ 0.5
CLN6-224ENST00000638076 NBL1P41271 181 aa18.15■□□□□ 0.5
CLN6-224ENST00000638076 UFSP2Q9NUQ7 469 aa18.15■□□□□ 0.5
CLN6-224ENST00000638076 FAM24AA6NFZ4 105 aa18.14■□□□□ 0.49
CLN6-224ENST00000638076 K7EM74 188 aa18.14■□□□□ 0.49
CLN6-224ENST00000638076 PVALBP20472 110 aaPredicted RBP18.14■□□□□ 0.49
CLN6-224ENST00000638076 CAV2P51636 162 aa18.14■□□□□ 0.49
CLN6-224ENST00000638076 BLOC1S1P78537 153 aa18.14■□□□□ 0.49
CLN6-224ENST00000638076 EWSR1Q01844 656 aaKnown RBP eCLIP18.14■□□□□ 0.494e-6■□□□□ 10.4
CLN6-224ENST00000638076 HMGN3Q15651 99 aa18.14■□□□□ 0.49
CLN6-224ENST00000638076 RPRMLQ8N4K4 120 aa18.14■□□□□ 0.49
CLN6-224ENST00000638076 LUZP4Q9P127 313 aa18.14■□□□□ 0.49
CLN6-224ENST00000638076 RBM7Q9Y580 266 aaKnown RBP18.14■□□□□ 0.49
CLN6-224ENST00000638076 SLC25A15Q9Y619 301 aa18.14■□□□□ 0.49
CLN6-224ENST00000638076 GTF3C1Q12789 2109 aa18.14■□□□□ 0.49
CLN6-224ENST00000638076 PSG2P11465 335 aa18.14■□□□□ 0.49
CLN6-224ENST00000638076 MBNL2Q5VZF2 373 aaKnown RBP18.14■□□□□ 0.49
CLN6-224ENST00000638076 WDR82Q6UXN9 313 aa18.14■□□□□ 0.49
CLN6-224ENST00000638076 TMEM231Q9H6L2 316 aa18.14■□□□□ 0.49
CLN6-224ENST00000638076 FAM215AQ9Y5M1 114 aa18.14■□□□□ 0.49
CLN6-224ENST00000638076 LOC105371267A0A1B0GV96 52 aa18.13■□□□□ 0.49
CLN6-224ENST00000638076 C1QTNF9BB2RNN3 333 aa18.13■□□□□ 0.49
CLN6-224ENST00000638076 PROB1E7EW31 1015 aa18.13■□□□□ 0.49
CLN6-224ENST00000638076 NXPH3O95157 252 aa18.13■□□□□ 0.49
CLN6-224ENST00000638076 SERPINE2P07093 398 aa18.13■□□□□ 0.49
CLN6-224ENST00000638076 ASCL1P50553 236 aa18.13■□□□□ 0.49
CLN6-224ENST00000638076 Q6ZRG5 221 aa18.13■□□□□ 0.49
CLN6-224ENST00000638076 GINS3Q9BRX5 216 aa18.13■□□□□ 0.49
CLN6-224ENST00000638076 PARP12Q9H0J9 701 aaKnown RBP18.13■□□□□ 0.49
CLN6-224ENST00000638076 TLNRD1Q9H1K6 362 aa18.13■□□□□ 0.49
CLN6-224ENST00000638076 TREM1Q9NP99 234 aa18.13■□□□□ 0.49
CLN6-224ENST00000638076 PARP11Q9NR21 331 aa18.13■□□□□ 0.49
CLN6-224ENST00000638076 PPP1R3CQ9UQK1 317 aa18.13■□□□□ 0.49
CLN6-224ENST00000638076 TSPAN4O14817 238 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 ATG12O94817 140 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 HEXAP06865 529 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 ADCYAP1P18509 176 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 LMO1P25800 156 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 CEACAM6P40199 344 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 ID3Q02535 119 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 ALKBH2Q6NS38 261 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 ACP7Q6ZNF0 438 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 RBMXL3Q8N7X1 1067 aaKnown RBP18.12■□□□□ 0.49
CLN6-224ENST00000638076 ABHD14BQ96IU4 210 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 FAM212BQ9NTI7 297 aaPredicted RBP18.12■□□□□ 0.49
CLN6-224ENST00000638076 RIF1Q5UIP0 2472 aaKnown RBP18.12■□□□□ 0.49
CLN6-224ENST00000638076 ZFHX2Q9C0A1 2572 aaPredicted RBP18.12■□□□□ 0.49
CLN6-224ENST00000638076 IGSF23A1L1A6 192 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 ID4P47928 161 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 SWI5Q1ZZU3 235 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 BTNL8Q6UX41 500 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 KCNS2Q9ULS6 477 aa18.12■□□□□ 0.49
CLN6-224ENST00000638076 A0A0G2JRQ6 117 aa18.11■□□□□ 0.49
CLN6-224ENST00000638076 TMEM30CPA0ZSE6 113 aa18.11■□□□□ 0.49
CLN6-224ENST00000638076 NUPL2O15504 423 aaKnown RBP18.11■□□□□ 0.49
CLN6-224ENST00000638076 TFF1P04155 84 aa18.11■□□□□ 0.49
CLN6-224ENST00000638076 OR8U9P0C7N5 309 aa18.11■□□□□ 0.49
CLN6-224ENST00000638076 SEC11BP0C7V7 166 aa18.11■□□□□ 0.49
CLN6-224ENST00000638076 VAMP2P63027 116 aa18.11■□□□□ 0.49
CLN6-224ENST00000638076 OR8U1Q8NH10 309 aa18.11■□□□□ 0.49
CLN6-224ENST00000638076 LYRM2Q9NU23 88 aaPredicted RBP18.11■□□□□ 0.49
CLN6-224ENST00000638076 SPP1P10451 314 aa18.11■□□□□ 0.49
CLN6-224ENST00000638076 ZNF474Q6S9Z5 364 aaPredicted RBP18.11■□□□□ 0.49
CLN6-224ENST00000638076 FAM169BQ8N8A8 192 aa18.11■□□□□ 0.49
CLN6-224ENST00000638076 AKR1E2Q96JD6 320 aa18.11■□□□□ 0.49
CLN6-224ENST00000638076 TSNAXQ99598 290 aaKnown RBP18.11■□□□□ 0.49
CLN6-224ENST00000638076 KCNIP1Q9NZI2 227 aa18.11■□□□□ 0.49
CLN6-224ENST00000638076 WNT2P09544 360 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 EPHA1P21709 976 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 F2RL1P55085 397 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 C1orf174Q8IYL3 243 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 HSD17B11Q8NBQ5 300 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 SNIP1Q8TAD8 396 aaKnown RBP18.1■□□□□ 0.49
CLN6-224ENST00000638076 PLEKHF2Q9H8W4 249 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 FAM96BQ9Y3D0 163 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 F8W036 122 aa18.1■□□□□ 0.49
CLN6-224ENST00000638076 AGPAT2O15120 278 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms