RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 CTDSPLO15194 276 aa17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 TAPBPO15533 448 aa17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 TMEFF1Q8IYR6 380 aa17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 MRPL43Q8N983 215 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 CYB5R3P00387 301 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 C16orf92Q96LL3 132 aa17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 PAXXQ9BUH6 204 aa17.15■□□□□ 0.34
CACNA1A-257ENST00000638009 CA11O75493 328 aa17.14■□□□□ 0.34
CACNA1A-257ENST00000638009 MDP1Q86V88 176 aa17.14■□□□□ 0.34
CACNA1A-257ENST00000638009 MMP9P14780 707 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 MPC1Q9Y5U8 109 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 B4GALT3O60512 393 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 AMY1AP04745 511 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 HKR1P10072 659 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 RTP5Q14D33 572 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 PPT2Q9UMR5 302 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 FMODQ06828 376 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 TSPAN32Q96QS1 320 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 OR2A4O95047 310 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 OR2A7Q96R45 310 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 TMEM56-RWDD3S4R434 201 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 TRAV8-7A0A075B6U6 113 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 TMPRSS2O15393 492 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 ZNF296Q8WUU4 475 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 RARRES2Q99969 163 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 SPRY1O43609 319 aaPredicted RBP17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 CYB5R2Q6BCY4 276 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 NIT1Q86X76 327 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 TTC9BQ8N6N2 239 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 DDA1Q9BW61 102 aa17.14■□□□□ 0.33
CACNA1A-257ENST00000638009 EPPINO95925 133 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 FTH1P19P0C7X4 201 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 FAM222BQ8WU58 562 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 DEFB127Q9H1M4 99 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 TMEM131Q92545 1883 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 ZNF252P-AS1Q0IIN9 211 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 OR10D3Q8NH80 312 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 BTAF1O14981 1849 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 RALGAPA2Q2PPJ7 1873 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 TRGV8A0A0C4DH27 118 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 C7orf77A4D0Y5 90 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 RNF224P0DH78 156 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 LAMTOR1Q6IAA8 161 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 TM4SF19Q96DZ7 209 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 MRGPRX1Q96LB2 322 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 ZNF98A6NK75 572 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 ALKBH3Q96Q83 286 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 SKP2Q13309 424 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 C16orf52Q8NHV5 167 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 UBE2FQ969M7 185 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 RABAC1Q9UI14 185 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 MMP16P51512 607 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 SUMO2P61956 95 aaKnown RBP17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 Q6ZSR9 355 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 FAM109BQ6ICB4 259 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 SCNM1Q9BWG6 230 aa17.13■□□□□ 0.33
CACNA1A-257ENST00000638009 GZMHP20718 246 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 RNF167Q9H6Y7 350 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 HCFC1R1Q9NWW0 138 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 TRAV17A0A0B4J275 112 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 IBA57Q5T440 356 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 FBXO17Q96EF6 278 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 OR51M1Q9H341 326 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 RICTORQ6R327 1708 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 ANKRD33Q7Z3H0 272 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 BAHD1Q8TBE0 780 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 SPATA46Q5T0L3 261 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 ATOH1Q92858 354 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 PRRC2AP48634 2157 aaKnown RBP17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 KIR3DL3Q8N743 410 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 P2RX4Q99571 388 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 TRGV5A0A0B4J1U4 118 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 ACVR1Q04771 509 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 ZNF880Q6PDB4 577 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 ALG14Q96F25 216 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 CITED2Q99967 270 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 PSG9Q00887 426 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 LDLRAD3Q86YD5 345 aa17.12■□□□□ 0.33
CACNA1A-257ENST00000638009 LEUTXA8MZ59 168 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 SEC11BP0C7V7 166 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 BCL2P10415 239 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 OR3A4PP47883 348 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 SOX4Q06945 474 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 LOC285556D6RIA3 1793 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 TRAV39A0A0B4J263 110 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 PLAURQ03405 335 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 LPAR2Q9HBW0 351 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 DHHO43323 396 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 CEACAM16Q2WEN9 425 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 HARBI1Q96MB7 349 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 PPP6CO00743 305 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 TCTN3Q6NUS6 607 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 ZNF418Q8TF45 676 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 EPHA8P29322 1005 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 CLEC18BQ6UXF7 455 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 CRYBG1Q9Y4K1 1723 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 SPNS2Q8IVW8 549 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 DLEC1Q9Y238 1755 aa17.11■□□□□ 0.33
CACNA1A-257ENST00000638009 PTGESO14684 152 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 ZGLP1P0C6A0 271 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms