RNA–Protein interactions for RNA: ENST00000637397.1

CLN5-218, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 5

Gene CLN5, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-218ENST00000637397 SLC24A4Q8NFF2 622 aa13.79□□□□□ -0.2
CLN5-218ENST00000637397 CACNA1EQ15878 2313 aa13.79□□□□□ -0.2
CLN5-218ENST00000637397 DANCRP0C864 163 aa13.79□□□□□ -0.2
CLN5-218ENST00000637397 CRISP2P16562 243 aa13.79□□□□□ -0.2
CLN5-218ENST00000637397 G6PCP35575 357 aa13.79□□□□□ -0.2
CLN5-218ENST00000637397 GNG4P50150 75 aa13.79□□□□□ -0.2
CLN5-218ENST00000637397 RPS23P62266 143 aaKnown RBP13.79□□□□□ -0.2
CLN5-218ENST00000637397 EIF4E3Q8N5X7 224 aaKnown RBP13.79□□□□□ -0.2
CLN5-218ENST00000637397 SLC25A28Q96A46 364 aa13.79□□□□□ -0.2
CLN5-218ENST00000637397 GPR61Q9BZJ8 451 aa13.79□□□□□ -0.2
CLN5-218ENST00000637397 DOK5Q9P104 306 aa13.79□□□□□ -0.2
CLN5-218ENST00000637397 TRGV10A0A0A0MS01 117 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 TMEM183BQ1AE95 376 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 C1QL2Q7Z5L3 287 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 ANAPC16Q96DE5 110 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 CARHSP1Q9Y2V2 147 aaKnown RBP13.78□□□□□ -0.2
CLN5-218ENST00000637397 FREM3P0C091 2139 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 ICE1Q9Y2F5 2266 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 M0R143 59 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 CYC1P08574 325 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 AMTP48728 403 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 BPIFB3P59826 476 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 RHOBP62745 196 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 ZNF658BQ4V348 819 aaPredicted RBP13.78□□□□□ -0.2
CLN5-218ENST00000637397 OR5A2Q8NGI9 324 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 NGBQ9NPG2 151 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 MTCL1Q9Y4B5 1905 aaKnown RBP13.78□□□□□ -0.2
CLN5-218ENST00000637397 TMEM11P17152 192 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 MEOX1P50221 254 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 RSPO4Q2I0M5 234 aaPredicted RBP13.78□□□□□ -0.2
CLN5-218ENST00000637397 SSX7Q7RTT5 188 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 OR10G8Q8NGN5 311 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 EGLN1Q9GZT9 426 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 ZDBF2Q9HCK1 2354 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 GYPAP02724 150 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 GNG10P50151 68 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 HES1Q14469 280 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 SSPNQ14714 243 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 ZADH2Q8N4Q0 377 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 OR4A4PQ8NGN8 299 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 SSMEM1Q8WWF3 244 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 MOB3AQ96BX8 217 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 ZPBPQ9BS86 351 aa13.78□□□□□ -0.2
CLN5-218ENST00000637397 FKBP11Q9NYL4 201 aa13.77□□□□□ -0.2
CLN5-218ENST00000637397 TCAPO15273 167 aa13.77□□□□□ -0.21
CLN5-218ENST00000637397 TINAGQ9UJW2 476 aa13.77□□□□□ -0.21
CLN5-218ENST00000637397 ZNF646O15015 1829 aaPredicted RBP13.77□□□□□ -0.21
CLN5-218ENST00000637397 HSPB1P04792 205 aaKnown RBP13.77□□□□□ -0.21
CLN5-218ENST00000637397 MELTFP08582 738 aa13.77□□□□□ -0.21
CLN5-218ENST00000637397 CCKARP32238 428 aa13.77□□□□□ -0.21
CLN5-218ENST00000637397 LRRC29Q8WV35 223 aa13.77□□□□□ -0.21
CLN5-218ENST00000637397 NUDT16L1Q9BRJ7 211 aaKnown RBP13.77□□□□□ -0.21
CLN5-218ENST00000637397 TGIF2-C20orf24A0A0A6YYL0 155 aa13.77□□□□□ -0.21
CLN5-218ENST00000637397 A0A1B0GTQ1 180 aa13.77□□□□□ -0.21
CLN5-218ENST00000637397 J3QT63 122 aa13.77□□□□□ -0.21
CLN5-218ENST00000637397 EIF3IQ13347 325 aaKnown RBP13.77□□□□□ -0.21
CLN5-218ENST00000637397 HFEQ30201 348 aa13.77□□□□□ -0.21
CLN5-218ENST00000637397 LRP11Q86VZ4 500 aa13.77□□□□□ -0.21
CLN5-218ENST00000637397 R3HDM4Q96D70 268 aa13.77□□□□□ -0.21
CLN5-218ENST00000637397 Q96M66 194 aa13.77□□□□□ -0.21
CLN5-218ENST00000637397 CBY1Q9Y3M2 126 aa13.77□□□□□ -0.21
CLN5-218ENST00000637397 CTXND1A0A1B0GTU2 59 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 FBP1P09467 338 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 CT45A10P0DMU9 189 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 C16orf82Q7Z2V1 217 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 ARRDC1-AS1Q9H2J1 176 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 ZNF355PQ9NSJ1 428 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 WNT16Q9UBV4 365 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 CLN8Q9UBY8 286 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 TUBD1Q9UJT1 453 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 TCFL5Q9UL49 500 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 HRASP01112 189 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 TCL1AP56279 114 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 CPEB3Q8NE35 698 aaKnown RBP13.76□□□□□ -0.21
CLN5-218ENST00000637397 VPS25Q9BRG1 176 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 GATCO43716 136 aaKnown RBP13.76□□□□□ -0.21
CLN5-218ENST00000637397 CYB5R3P00387 301 aaPredicted RBP13.76□□□□□ -0.21
CLN5-218ENST00000637397 CA5BP1Q8WTZ4 195 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 SLC45A2Q9UMX9 530 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 APC2O95996 2303 aa13.76□□□□□ -0.21
CLN5-218ENST00000637397 SERF2P84101 59 aa13.75□□□□□ -0.21
CLN5-218ENST00000637397 A0A1B0GTI1 187 aa13.75□□□□□ -0.21
CLN5-218ENST00000637397 PQLC2LA1A4F0 135 aa13.75□□□□□ -0.21
CLN5-218ENST00000637397 MAGEA5P43359 124 aa13.75□□□□□ -0.21
CLN5-218ENST00000637397 HIKESHIQ53FT3 197 aa13.75□□□□□ -0.21
CLN5-218ENST00000637397 SMRP1Q8NCR6 262 aa13.75□□□□□ -0.21
CLN5-218ENST00000637397 C3orf80F5H4A9 247 aa13.75□□□□□ -0.21
CLN5-218ENST00000637397 RRP8O43159 456 aaKnown RBP13.75□□□□□ -0.21
CLN5-218ENST00000637397 DNPH1O43598 174 aa13.75□□□□□ -0.21
CLN5-218ENST00000637397 IGHMP01871 453 aa13.75□□□□□ -0.21
CLN5-218ENST00000637397 ACAA1P09110 424 aaPredicted RBP13.75□□□□□ -0.21
CLN5-218ENST00000637397 CHRDL1Q9BU40 450 aa13.75□□□□□ -0.21
CLN5-218ENST00000637397 RAMP1O60894 148 aa13.74□□□□□ -0.21
CLN5-218ENST00000637397 HAND1O96004 215 aa13.74□□□□□ -0.21
CLN5-218ENST00000637397 PGA5P0DJD9 388 aa13.74□□□□□ -0.21
CLN5-218ENST00000637397 SRSF3P84103 164 aaKnown RBP13.74□□□□□ -0.21
CLN5-218ENST00000637397 TMEM187Q14656 261 aa13.74□□□□□ -0.21
CLN5-218ENST00000637397 STUMQ69YW2 141 aa13.74□□□□□ -0.21
CLN5-218ENST00000637397 DPPA3Q6W0C5 159 aa13.74□□□□□ -0.21
CLN5-218ENST00000637397 SMIM15Q7Z3B0 74 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms