RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 PRB3Q04118 309 aaPredicted RBP13.08□□□□□ -0.32
CLN6-216ENST00000636876 HMGN3Q15651 99 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 HCP5Q6MZN7 132 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 OR10A7Q8NGE5 316 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 UBALD1Q8TB05 177 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 NUDCD2Q8WVJ2 157 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 KIRREL1Q96J84 757 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 BEX2Q9BXY8 128 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 MMP27Q9H306 513 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 Q9N2K0 584 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 RAB9BQ9NP90 201 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 IDI2-AS1Q9NZ38 188 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 MGAT4AQ9UM21 535 aa13.08□□□□□ -0.32
CLN6-216ENST00000636876 SVEP1Q4LDE5 3571 aa13.07□□□□□ -0.32
CLN6-216ENST00000636876 CENPVL3A0A0U1RRI6 287 aa13.07□□□□□ -0.32
CLN6-216ENST00000636876 SSX5O60225 188 aa13.07□□□□□ -0.32
CLN6-216ENST00000636876 PTHLHP12272 177 aa13.07□□□□□ -0.32
CLN6-216ENST00000636876 GPR157Q5UAW9 335 aa13.07□□□□□ -0.32
CLN6-216ENST00000636876 OR52W1Q6IF63 320 aa13.07□□□□□ -0.32
CLN6-216ENST00000636876 CNIH2Q6PI25 160 aa13.07□□□□□ -0.32
CLN6-216ENST00000636876 OR1L1Q8NH94 360 aa13.07□□□□□ -0.32
CLN6-216ENST00000636876 SUCNR1Q9BXA5 334 aa13.07□□□□□ -0.32
CLN6-216ENST00000636876 TMEM133Q9H2Q1 129 aa13.07□□□□□ -0.32
CLN6-216ENST00000636876 EXTL2Q9UBQ6 330 aa13.07□□□□□ -0.32
CLN6-216ENST00000636876 IGHV3OR16-10A0A075B7F0 116 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 IGHV1-69DA0A0B4J2H0 117 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 F2RL2O00254 374 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 IGHV1-69P01742 117 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 HLA-DQB1P01920 261 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 COX7A1P24310 79 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 FPR2P25090 351 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 NFYBP25208 207 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 UBE2E1P51965 193 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 HLA-DRB3P79483 266 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 GUCA2AQ02747 115 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 LTC4SQ16873 150 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 TMEM30BQ3MIR4 351 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 BAIAP2L2Q6UXY1 529 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 C5orf24Q7Z6I8 188 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 PDZD9Q8IXQ8 264 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 PNKDQ8N490 385 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 PRR18Q8N4B5 295 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 OR52M1Q8NGK5 317 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 OR13D1Q8NGV5 346 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 NUP50Q9UKX7 468 aa13.06□□□□□ -0.32
CLN6-216ENST00000636876 MRPS7Q9Y2R9 242 aaKnown RBP13.06□□□□□ -0.32
CLN6-216ENST00000636876 TRDCB7Z8K6 153 aa13.05□□□□□ -0.32
CLN6-216ENST00000636876 TPPPO94811 219 aa13.05□□□□□ -0.32
CLN6-216ENST00000636876 CD34P28906 385 aa13.05□□□□□ -0.32
CLN6-216ENST00000636876 MADCAM1Q13477 382 aa13.05□□□□□ -0.32
CLN6-216ENST00000636876 SRSF7Q16629 238 aaKnown RBP eCLIP13.05□□□□□ -0.32
CLN6-216ENST00000636876 CHRFAM7AQ494W8 412 aa13.05□□□□□ -0.32
CLN6-216ENST00000636876 Q6ZS49 121 aa13.05□□□□□ -0.32
CLN6-216ENST00000636876 MAFIPQ8WZ33 124 aa13.05□□□□□ -0.32
CLN6-216ENST00000636876 GCDHQ92947 438 aaPredicted RBP13.05□□□□□ -0.32
CLN6-216ENST00000636876 DIRAS2Q96HU8 199 aa13.05□□□□□ -0.32
CLN6-216ENST00000636876 GFOD1Q9NXC2 390 aa13.05□□□□□ -0.32
CLN6-216ENST00000636876 ZNF230Q9UIE0 474 aaPredicted RBP13.05□□□□□ -0.32
CLN6-216ENST00000636876 A0A087X0M5 115 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 IGHV2-26A0A0B4J1V2 119 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 A0A1B0GX30 115 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 A0A1W2PRD5 423 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 A0A1W2PRF3 423 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 A0A1W2PRM7 423 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 FAM172BPA6NC97 362 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 SDCBPO00560 298 aaPredicted RBP13.04□□□□□ -0.32
CLN6-216ENST00000636876 CRLF1O75462 422 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 SRD5A1P18405 259 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 TNFSF8P32971 234 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 PRSS3P35030 304 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 KIR2DS4P43632 304 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 CBX5P45973 191 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 LOXL3P58215 753 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 BPIFB3P59826 476 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 KIR2DS1Q14954 304 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 CNPY1Q3B7I2 92 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 UTF1Q5T230 341 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 RUSC1-AS1Q66K80 236 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 BRD3OSQ6XYD6 125 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 SNX29P2Q8IUI4 249 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 OR11H6Q8NGC7 330 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 GALMQ96C23 342 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 OCSTAMPQ9BR26 566 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 ST6GALNAC5Q9BVH7 336 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 CLEC7AQ9BXN2 247 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 ZNF286AQ9HBT8 521 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 ZNF69Q9UC07 566 aa13.04□□□□□ -0.32
CLN6-216ENST00000636876 IGHV3-43A0A0B4J1X8 118 aa13.03□□□□□ -0.32
CLN6-216ENST00000636876 ODF3BA8MYP8 253 aa13.03□□□□□ -0.32
CLN6-216ENST00000636876 NPFFO15130 113 aa13.03□□□□□ -0.32
CLN6-216ENST00000636876 FABP7O15540 132 aa13.03□□□□□ -0.32
CLN6-216ENST00000636876 SCTP09683 121 aa13.03□□□□□ -0.32
CLN6-216ENST00000636876 IGHV3-43DP0DP04 118 aa13.03□□□□□ -0.32
CLN6-216ENST00000636876 EPHA1P21709 976 aa13.03□□□□□ -0.32
CLN6-216ENST00000636876 S100A5P33763 92 aa13.03□□□□□ -0.32
CLN6-216ENST00000636876 HTD2P86397 168 aa13.03□□□□□ -0.32
CLN6-216ENST00000636876 ZNF626Q68DY1 528 aa13.03□□□□□ -0.32
CLN6-216ENST00000636876 FAM53AQ6NSI3 398 aaPredicted RBP13.03□□□□□ -0.32
CLN6-216ENST00000636876 C9orf139Q6ZV77 190 aa13.03□□□□□ -0.32
CLN6-216ENST00000636876 ABHD12Q8N2K0 398 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms