RNA–Protein interactions for RNA: ENST00000636768.1

CACNA1A-230, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,034 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-230ENST00000636768 OR4K15Q8NH41 348 aa11.93□□□□□ -0.5
CACNA1A-230ENST00000636768 DCLRE1BQ9H816 532 aa11.93□□□□□ -0.5
CACNA1A-230ENST00000636768 FKBP14Q9NWM8 211 aa11.93□□□□□ -0.5
CACNA1A-230ENST00000636768 GNG12Q9UBI6 72 aa11.93□□□□□ -0.5
CACNA1A-230ENST00000636768 IGHV3-72A0A0B4J1Y9 119 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 IGHV1-3A0A0C4DH29 117 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 FAM90A10PA6NDY2 464 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 FAM90A7PA6NKC0 464 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 FAM90A23PA8MXZ1 464 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 C12orf77C9JDV5 145 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 PTGES3LE9PB15 166 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 PRB2P02812 416 aaPredicted RBP11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 CDK1P06493 297 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 CD33P20138 364 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 C10orf99Q6UWK7 81 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 LINC00311Q8N616 119 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 C5orf56Q8N8D9 126 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 C8orf31Q8N9H6 132 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 TMEM104Q8NE00 496 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 FAM46BQ96A09 425 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 UQCC2Q9BRT2 126 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 TMED9Q9BVK6 235 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 SCN3BQ9NY72 215 aa11.92□□□□□ -0.5
CACNA1A-230ENST00000636768 UBE2QL1A1L167 161 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 PSMB11A5LHX3 300 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 SERPINE3A8MV23 424 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 FGF16O43320 207 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 CA11O75493 328 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 FUT3P21217 361 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 VHLP40337 213 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 LOXL3P58215 753 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 INSL4Q14641 139 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 TMEM30BQ3MIR4 351 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 ACSM3Q53FZ2 586 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 RBM48Q5RL73 367 aaKnown RBP11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 FAM53AQ6NSI3 398 aaPredicted RBP11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 TRAT1Q6PIZ9 186 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 REC114Q7Z4M0 266 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 MS4A15Q8N5U1 240 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 OR10V1Q8NGI7 309 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 SGCDQ92629 289 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 Q96M66 194 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 CST11Q9H112 138 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 GHRLQ9UBU3 117 aa11.91□□□□□ -0.5
CACNA1A-230ENST00000636768 NCBP2LA6PVI3 153 aaKnown RBP11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 PDCD6O75340 191 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 MPIG6BO95866 241 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 HBZP02008 142 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 GLAP06280 429 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 UBBP0CG47 229 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 SPHARQ15513 63 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 MED22Q15528 200 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 Q3ZCU0 254 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 NKAPLQ5M9Q1 402 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 C6orf141Q5SZD1 244 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 FAM27D1Q5T7N8 215 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 RNLSQ5VYX0 342 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 SLC35E3Q7Z769 313 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 ZNF329Q86UD4 541 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 LYPD6Q86Y78 171 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 IZUMO1Q8IYV9 350 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 OR1L1Q8NH94 360 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 CHPT1Q8WUD6 406 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 RTN4IP1Q8WWV3 396 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 KCNIP1Q9NZI2 227 aa11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 NKX1-2Q9UD57 310 aaPredicted RBP11.9□□□□□ -0.5
CACNA1A-230ENST00000636768 TGP01266 2768 aa11.9□□□□□ -0.51
CACNA1A-230ENST00000636768 H0YHG0 523 aa11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 SLC31A2O15432 143 aa11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 SC5DO75845 299 aa11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 RCC1P18754 421 aaPredicted RBP11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 AQP4P55087 323 aa11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 GLT8D1Q68CQ7 371 aa11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 SIGIRRQ6IA17 410 aa11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 SLC25A48Q6ZT89 311 aaKnown RBP11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 FOXRED2Q8IWF2 684 aa11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 GAPTQ8N292 157 aa11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 OR2T10Q8NGZ9 312 aa11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 PHYHIPQ92561 330 aa11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 PHF21AQ96BD5 680 aa11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 EAF1Q96JC9 268 aaPredicted RBP11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 NOL4LQ96MY1 436 aaPredicted RBP11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 NEDD4LQ96PU5 975 aa11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 TAF9BQ9HBM6 251 aa11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 NECAP2Q9NVZ3 263 aa11.89□□□□□ -0.51
CACNA1A-230ENST00000636768 TXNL1O43396 289 aa11.88□□□□□ -0.51
CACNA1A-230ENST00000636768 IGLL1P15814 213 aa11.88□□□□□ -0.51
CACNA1A-230ENST00000636768 CD1BP29016 333 aa11.88□□□□□ -0.51
CACNA1A-230ENST00000636768 SLC35A2P78381 396 aa11.88□□□□□ -0.51
CACNA1A-230ENST00000636768 SLC35B1P78383 322 aa11.88□□□□□ -0.51
CACNA1A-230ENST00000636768 EBI3Q14213 229 aa11.88□□□□□ -0.51
CACNA1A-230ENST00000636768 HSD17B12Q53GQ0 312 aa11.88□□□□□ -0.51
CACNA1A-230ENST00000636768 UNQ9370/PRO34162Q6UXP9 181 aa11.88□□□□□ -0.51
CACNA1A-230ENST00000636768 CEACAM19Q7Z692 300 aa11.88□□□□□ -0.51
CACNA1A-230ENST00000636768 LRRTM1Q86UE6 522 aa11.88□□□□□ -0.51
CACNA1A-230ENST00000636768 TGIF2LXQ8IUE1 241 aa11.88□□□□□ -0.51
CACNA1A-230ENST00000636768 ZNF439Q8NDP4 499 aa11.88□□□□□ -0.51
CACNA1A-230ENST00000636768 UFD1Q92890 307 aa11.88□□□□□ -0.51
CACNA1A-230ENST00000636768 ST6GALNAC6Q969X2 333 aa11.88□□□□□ -0.51
CACNA1A-230ENST00000636768 TMEM59Q9BXS4 323 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms