RNA–Protein interactions for RNA: ENST00000635828.1

CDKL5-209, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5 BASIC

Gene CDKL5, Length 3,823 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-209ENST00000635828 FAM90A5PA8MXJ8 464 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 FAM90A23PA8MXZ1 464 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 SDCBPO00560 298 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-209ENST00000635828 FAM90A15PP0C7V4 464 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 FAM90A13PP0C7W8 464 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 FAM90A14PP0C7W9 464 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 FAM90A24PP0C7X0 464 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 RFX2P48378 723 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 ZNF79Q15937 498 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 OR4D10Q8NGI6 311 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 DIRAS2Q96HU8 199 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 Q9N2K0 584 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 BET1O15155 118 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 REG1BP48304 166 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 ZNF565Q8N9K5 539 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 C12orf4Q9NQ89 552 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 SLC23A1Q9UHI7 598 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 PSG11Q9UQ72 335 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 V9GYH0 126 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 APOA1P02647 267 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 DYNC1I2Q13409 638 aaKnown RBP6.93□□□□□ -1.3
CDKL5-209ENST00000635828 OR52I2Q8NH67 350 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 SEBOXQ9HB31 216 aaPredicted RBP6.93□□□□□ -1.3
CDKL5-209ENST00000635828 HILPDAQ9Y5L2 63 aa6.93□□□□□ -1.3
CDKL5-209ENST00000635828 IGHV2-26A0A0B4J1V2 119 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 NPIPB11E5RHQ5 1161 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 HLA-DMAP28067 261 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 SAA4P35542 130 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 ZNF880Q6PDB4 577 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 LYSMD2Q8IV50 215 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 CROCCP3Q8IVE0 287 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 CORO2AQ92828 525 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 UPRTQ96BW1 309 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 KCTD12Q96CX2 325 aaKnown RBP6.92□□□□□ -1.3
CDKL5-209ENST00000635828 SLC6A7Q99884 636 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 BCL7BQ9BQE9 202 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 METTL8Q9H825 291 aaKnown RBP6.92□□□□□ -1.3
CDKL5-209ENST00000635828 SPACA1Q9HBV2 294 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 TRBV23-1A0A0A0MS06 115 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 ZNF701M0R085 212 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-209ENST00000635828 ECDO95905 644 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-209ENST00000635828 FOSL1P15407 271 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 NFYAP23511 347 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-209ENST00000635828 IL18Q14116 193 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 HEPN1Q6WQI6 88 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 ABHD12Q8N2K0 398 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 OR2S2Q9NQN1 319 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 RNF150Q9ULK6 438 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 C2CD3Q4AC94 2353 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 FSHBP01225 129 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 MEF2CQ06413 473 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-209ENST00000635828 PPP1R35Q8TAP8 253 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 AP3S1Q92572 193 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 PHF21AQ96BD5 680 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 ABHD14BQ96IU4 210 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 SDHCQ99643 169 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-209ENST00000635828 ESM1Q9NQ30 184 aa6.92□□□□□ -1.3
CDKL5-209ENST00000635828 UBE2J1Q9Y385 318 aaPredicted RBP6.92□□□□□ -1.3
CDKL5-209ENST00000635828 ZNF736B4DX44 427 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-209ENST00000635828 GPR37O15354 613 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 ST8SIA5O15466 376 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 ARG1P05089 322 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 PRTN3P24158 256 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 GNG2P59768 71 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 DEFB112Q30KQ8 113 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 CT45A1Q5HYN5 189 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 CT45A3Q8NHU0 189 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 ACOT12Q8WYK0 555 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 C5orf30Q96GV9 206 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 BEX2Q9BXY8 128 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 TMEM133Q9H2Q1 129 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 DIABLOQ9NR28 239 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 OR6C3Q9NZP0 311 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 KPTNQ9Y664 436 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 PMP2P02689 132 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 OR3A3P47888 321 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 PAX5Q02548 391 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 HMGN3Q15651 99 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 SSX2Q16385 188 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 DRAXINQ8NBI3 349 aaPredicted RBP6.91□□□□□ -1.3
CDKL5-209ENST00000635828 OR4P4Q8NGL7 312 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 OR6Q1Q8NGQ2 317 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 IDI2-AS1Q9NZ38 188 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 COL6A5A8TX70 2615 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 M0QYG6 137 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 PROP1O75360 226 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 BAK1Q16611 211 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 PRIMA1Q86XR5 153 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 POM121Q96HA1 1249 aa6.91□□□□□ -1.3
CDKL5-209ENST00000635828 PLXNB1O43157 2135 aa6.9□□□□□ -1.3
CDKL5-209ENST00000635828 IGHV3-72A0A0B4J1Y9 119 aa6.9□□□□□ -1.3
CDKL5-209ENST00000635828 IGHV1-69DA0A0B4J2H0 117 aa6.9□□□□□ -1.3
CDKL5-209ENST00000635828 SERPINE3A8MV23 424 aa6.9□□□□□ -1.3
CDKL5-209ENST00000635828 IGHV1-69P01742 117 aa6.9□□□□□ -1.3
CDKL5-209ENST00000635828 MELTFP08582 738 aa6.9□□□□□ -1.3
CDKL5-209ENST00000635828 CEACAM6P40199 344 aa6.9□□□□□ -1.3
CDKL5-209ENST00000635828 MORN2Q502X0 79 aa6.9□□□□□ -1.3
CDKL5-209ENST00000635828 MZT2AQ6P582 158 aa6.9□□□□□ -1.3
CDKL5-209ENST00000635828 FAM131AQ6UXB0 335 aa6.9□□□□□ -1.3
CDKL5-209ENST00000635828 SOSTQ9BQB4 213 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms