RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 MYBPHLA2RUH7 354 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 MSGN1A6NI15 193 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 PMS2P5A8MQ11 134 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 B4DXG7 233 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 F6UB75 175 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF207O43670 478 aaKnown RBP2.32□□□□□ -2.04
PSPC1-208ENST00000635562 REM1O75628 298 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 UPK1BO75841 260 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 C6orf47O95873 294 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 NGFP01138 241 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 P01737 135 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 HBZP02008 142 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 OR9G9P0C7N8 305 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 SLC35G6P0C7Q6 338 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 FAM236CP0DP71 79 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 RPL7P18124 248 aaKnown RBP2.32□□□□□ -2.04
PSPC1-208ENST00000635562 RCC1P18754 421 aaPredicted RBP2.32□□□□□ -2.04
PSPC1-208ENST00000635562 ATF1P18846 271 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 CXCL3P19876 107 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 AZU1P20160 251 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 EVI2AP22794 236 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 CNTFRP26992 372 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 CMPK1P30085 196 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 MYCNOSP40205 109 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 PPICP45877 212 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 GPM6AP51674 278 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 TAS2R30P59541 319 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 C1QTNF8P60827 252 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 HBA1P69905 142 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 PSG9Q00887 426 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF92Q03936 586 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 PRDX1Q06830 199 aaKnown RBP2.32□□□□□ -2.04
PSPC1-208ENST00000635562 PMAIP1Q13794 54 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 FCN2Q15485 313 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 TMEM255AQ5JRV8 349 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 KRTAP5-4Q6L8H1 288 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 FAM53AQ6NSI3 398 aaPredicted RBP2.32□□□□□ -2.04
PSPC1-208ENST00000635562 NAA40Q86UY6 237 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 C12orf45Q8N5I9 185 aaPredicted RBP2.32□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF615Q8N8J6 731 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 TSTD1Q8NFU3 115 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 OR4M1Q8NGD0 313 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 OR5W2Q8NH69 310 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 OR1L3Q8NH93 324 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 NEIL3Q8TAT5 605 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF564Q8TBZ8 553 aaPredicted RBP2.32□□□□□ -2.04
PSPC1-208ENST00000635562 OR51E1Q8TCB6 317 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 NAT14Q8WUY8 206 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 BLNKQ8WV28 456 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 APOBEC4Q8WW27 367 aaKnown RBP2.32□□□□□ -2.04
PSPC1-208ENST00000635562 TMEM190Q8WZ59 177 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 DCUN1D4Q92564 292 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 FGF11Q92914 225 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 FGF14Q92915 247 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 TMEM54Q969K7 222 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 HIST1H2BAQ96A08 127 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 PLEKHB2Q96CS7 222 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 SLC25A38Q96DW6 304 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 NDFIP1Q9BT67 221 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 ULBP3Q9BZM4 244 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 C20orf27Q9GZN8 174 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 RNASE7Q9H1E1 156 aaKnown RBP2.32□□□□□ -2.04
PSPC1-208ENST00000635562 OR51I2Q9H344 312 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 GNB4Q9HAV0 340 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 POPDC3Q9HBV1 291 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 SPHK2Q9NRA0 654 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 MRPL16Q9NX20 251 aaKnown RBP2.32□□□□□ -2.04
PSPC1-208ENST00000635562 METTL1Q9UBP6 276 aaKnown RBP2.32□□□□□ -2.04
PSPC1-208ENST00000635562 NAT8BQ9UHF3 227 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 TRAPPC2LQ9UL33 140 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 MCTS1Q9ULC4 181 aaKnown RBP2.32□□□□□ -2.04
PSPC1-208ENST00000635562 HS3ST2Q9Y278 367 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 UBIAD1Q9Y5Z9 338 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 DOCK5Q9H7D0 1870 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 TONSLQ96HA7 1378 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 ABCC12Q96J65 1359 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 USP6P35125 1406 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 PTPRKQ15262 1439 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 ARHGEF11O15085 1522 aa2.32□□□□□ -2.04
PSPC1-208ENST00000635562 SETD1AO15047 1707 aaKnown RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 LRRIQ1Q96JM4 1722 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 NUP210Q8TEM1 1887 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 LOXHD1Q8IVV2 1947 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 TRIP11Q15643 1979 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 IGKV1D-8A0A087WSZ0 117 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 TRAV30A0A087WSZ9 112 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 LOC100131303A0A0U1RQF7 123 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF726A6NNF4 738 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 FABP5P3A8MUU1 101 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 ZNF705EA8MWA4 302 aaPredicted RBP2.31□□□□□ -2.04
PSPC1-208ENST00000635562 A8MWP6 167 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 SHISA9B4DS77 424 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 INMT-MINDY4F8WBC2 141 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 H3BQF6 201 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 H7C1C5 153 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 J3QT63 122 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 K7EQS6 105 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 UPK1AO00322 258 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 CCL25O15444 150 aa2.31□□□□□ -2.04
PSPC1-208ENST00000635562 OR7C2O60412 319 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms