RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 PRSS57Q6UWY2 283 aa12.03□□□□□ -0.48
LINC00339-208ENST00000634934 GSG1LQ6UXU4 331 aa12.03□□□□□ -0.48
LINC00339-208ENST00000634934 ZNF788Q6ZQV5 615 aa12.03□□□□□ -0.48
LINC00339-208ENST00000634934 C12orf45Q8N5I9 185 aaPredicted RBP12.03□□□□□ -0.48
LINC00339-208ENST00000634934 GAFA1Q96PS6 74 aa12.03□□□□□ -0.48
LINC00339-208ENST00000634934 LOC105371267A0A1B0GV96 52 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A10PA6NDY2 464 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A18PA6NE21 464 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A16PA6NEW6 464 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A20PA6NIJ5 464 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A8PA6NJQ4 464 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A7PA6NKC0 464 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A22PA8MWA6 464 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A12PA8MX19 464 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A5PA8MXJ8 464 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A23PA8MXZ1 464 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 DISC1C4P0D8 188 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 TNFRSF13BO14836 293 aaPredicted RBP12.02□□□□□ -0.48
LINC00339-208ENST00000634934 OR2F2O95006 317 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FGF2P09038 288 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 OR4E1P0C645 316 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A15PP0C7V4 464 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A13PP0C7W8 464 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A14PP0C7W9 464 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM90A24PP0C7X0 464 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 SELLP14151 372 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 RPS2P15880 293 aaKnown RBP12.02□□□□□ -0.48
LINC00339-208ENST00000634934 SLC25A16P16260 332 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 IL13RA1P78552 427 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 OR2F1Q13607 317 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 MOGAT2Q3SYC2 334 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 PAN3Q58A45 887 aaKnown RBP12.02□□□□□ -0.48
LINC00339-208ENST00000634934 BRICD5Q6PL45 260 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 FAM89BQ8N5H3 189 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 CHST4Q8NCG5 386 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 ZNRF1Q8ND25 227 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 TMEM185AQ8NFB2 350 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 OR5M8Q8NGP6 311 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 SDSLQ96GA7 329 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 Q96MF0 132 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 SDHAF2Q9NX18 166 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 RDH8Q9NYR8 311 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 MIOXQ9UGB7 285 aa12.02□□□□□ -0.48
LINC00339-208ENST00000634934 HIVEP1P15822 2718 aa12.02□□□□□ -0.49
LINC00339-208ENST00000634934 FLNAP21333 2647 aaKnown RBP12.02□□□□□ -0.49
LINC00339-208ENST00000634934 TRAV24A0A0B4J272 114 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 IGHV4-61A0A0C4DH41 118 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 ZNF736B4DX44 427 aaPredicted RBP12.01□□□□□ -0.49
LINC00339-208ENST00000634934 SLC33A1O00400 549 aaPredicted RBP12.01□□□□□ -0.49
LINC00339-208ENST00000634934 SIGLEC5O15389 551 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 PDCD6O75340 191 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 RLN1P04808 185 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 PTHLHP12272 177 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 FUT3P21217 361 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 ZNF260Q3ZCT1 412 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 FAAP20Q6NZ36 180 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 SLC25A42Q86VD7 318 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 BPIFB2Q8N4F0 458 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 ZNF561Q8N587 486 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 SUMF2Q8NBJ7 301 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 OR4D10Q8NGI6 311 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 OR10R2Q8NGX6 335 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 CLDND2Q8NHS1 167 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 NEK7Q8TDX7 302 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 POM121Q96HA1 1249 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 CHIAQ9BZP6 476 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 CHST6Q9GZX3 395 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 SEBOXQ9HB31 216 aaPredicted RBP12.01□□□□□ -0.49
LINC00339-208ENST00000634934 PATZ1Q9HBE1 687 aaKnown RBP12.01□□□□□ -0.49
LINC00339-208ENST00000634934 SPACA1Q9HBV2 294 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 PFDN2Q9UHV9 154 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 RAB27BO00194 218 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 NDUFB3O43676 98 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 PSPNO60542 156 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 NAT1P18440 290 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 LMO1P25800 156 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 CHATP28329 748 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 LY6G6FQ5SQ64 297 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 C17orf107Q6ZR85 190 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 C6orf201Q7Z4U5 140 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 RTN4RL2Q86UN3 420 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 KCNRGQ8N5I3 272 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 OR8B3Q8NGG8 313 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 RAB3CQ96E17 227 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 NEIL1Q96FI4 390 aaPredicted RBP12.01□□□□□ -0.49
LINC00339-208ENST00000634934 ARHGAP5-AS1Q96IT6 56 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 SNX22Q96L94 193 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 OR8B2Q96RD0 313 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 IFT22Q9H7X7 185 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 PLEKHJ1Q9NW61 149 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 KAAG1Q9UBP8 84 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 CTSZQ9UBR2 303 aa12.01□□□□□ -0.49
LINC00339-208ENST00000634934 DVL1O14640 695 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 GOSR2O14653 212 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 ZNF737O75373 536 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 WNT2P09544 360 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 NDUFB7P17568 137 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 USF1P22415 310 aaPredicted RBP12□□□□□ -0.49
LINC00339-208ENST00000634934 TMEM50BP56557 158 aa12□□□□□ -0.49
LINC00339-208ENST00000634934 GUCA2AQ02747 115 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms