RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 ZNF660Q6AZW8 331 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-230ENST00000634433 BHLHA15Q7RTS1 189 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-230ENST00000634433 SLC51BQ86UW2 128 aa6.09□□□□□ -1.43
BRCA1-230ENST00000634433 CCDC71LQ8N9Z2 235 aa6.09□□□□□ -1.43
BRCA1-230ENST00000634433 WDR31Q8NA23 367 aa6.09□□□□□ -1.43
BRCA1-230ENST00000634433 Q8NA96 180 aa6.09□□□□□ -1.43
BRCA1-230ENST00000634433 INO80EQ8NBZ0 244 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-230ENST00000634433 SLC25A40Q8TBP6 338 aa6.09□□□□□ -1.43
BRCA1-230ENST00000634433 PPP1R1CQ8WVI7 109 aa6.09□□□□□ -1.43
BRCA1-230ENST00000634433 STARD4Q96DR4 205 aa6.09□□□□□ -1.43
BRCA1-230ENST00000634433 SEC22AQ96IW7 307 aa6.09□□□□□ -1.43
BRCA1-230ENST00000634433 OR2J1Q9GZK6 312 aa6.09□□□□□ -1.43
BRCA1-230ENST00000634433 METTL8Q9H825 291 aaKnown RBP6.09□□□□□ -1.43
BRCA1-230ENST00000634433 ZNF71Q9NQZ8 489 aaPredicted RBP6.09□□□□□ -1.43
BRCA1-230ENST00000634433 RAXQ9Y2V3 346 aa6.09□□□□□ -1.43
BRCA1-230ENST00000634433 IGKV1D-8A0A087WSZ0 117 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 TRAV14DV4A0A0A6YYC5 116 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 LINC00862A6NCI5 91 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 SH2D7A6NKC9 451 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-230ENST00000634433 EEF1E1-BLOC1S5C9J1V9 151 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 CCSO14618 274 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 C1QL1O75973 258 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 KNG1P01042 644 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 CGAP01215 116 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 IFNA21P01568 189 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 PET100P0DJ07 73 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 TIMP3P35625 211 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 ID1P41134 155 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 BAMBIQ13145 260 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 EXOSC2Q13868 293 aaKnown RBP6.08□□□□□ -1.44
BRCA1-230ENST00000634433 SLC9A3R2Q15599 337 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 ZNF718Q3SXZ3 478 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 PDLIM3Q53GG5 364 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-230ENST00000634433 CLLU1Q5K131 121 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 SPATA46Q5T0L3 261 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 TEX38Q6PEX7 206 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 UQCC3Q6UW78 93 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 ACOT7LQ6ZUV0 252 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 RBMXL3Q8N7X1 1067 aaKnown RBP6.08□□□□□ -1.44
BRCA1-230ENST00000634433 NEK7Q8TDX7 302 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 BSCL2Q96G97 398 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-230ENST00000634433 TMEM100Q9NV29 134 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 CRIM1Q9NZV1 1036 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 ZNF629Q9UEG4 869 aaPredicted RBP6.08□□□□□ -1.44
BRCA1-230ENST00000634433 TRBV6-6A0A0A6YYG2 114 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 A0A1W2PR80 420 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 CRYM-AS1A6NIL9 109 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 OR5H1A6NKK0 313 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 H0Y8G0 127 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 DEGS1O15121 323 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 ZNHIT1O43257 154 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 SYNGR1O43759 233 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 TNFSF13O75888 250 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 WISP2O76076 250 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 FCGR2CP31995 323 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 MDH2P40926 338 aaKnown RBP6.08□□□□□ -1.44
BRCA1-230ENST00000634433 SUPT4H1P63272 117 aaKnown RBP6.08□□□□□ -1.44
BRCA1-230ENST00000634433 OR8G1Q15617 311 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 DGAT2L7PQ6IED9 249 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 FAM180AQ6UWF9 173 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 ZNF843Q8N446 348 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 KCNRGQ8N5I3 272 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 BEND2Q8NDZ0 799 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 C2orf50Q96LR7 162 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 ADAT1Q9BUB4 502 aaKnown RBP6.08□□□□□ -1.44
BRCA1-230ENST00000634433 SUCNR1Q9BXA5 334 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 WDR13Q9H1Z4 485 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 Q9N2K0 584 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 GLS2Q9UI32 602 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 TNFSF18Q9UNG2 199 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 IGF2RP11717 2491 aa6.08□□□□□ -1.44
BRCA1-230ENST00000634433 A0A1B0GW55 424 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 KANTRA0A1W2PQU2 76 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 TRDCB7Z8K6 153 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 NAPSAO96009 420 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 IGLV1-44P01699 117 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 AMY1AP04745 511 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 DUX4L2P0CJ85 424 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 DUX4L3P0CJ86 424 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 DUX4L4P0CJ87 422 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 DUX4L5P0CJ88 424 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 DUX4L6P0CJ89 424 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 DUX4L7P0CJ90 424 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 PI3P19957 117 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 AP2S1P53680 142 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-230ENST00000634433 UBA52P62987 128 aaKnown RBP6.07□□□□□ -1.44
BRCA1-230ENST00000634433 CD69Q07108 199 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 FOXF2Q12947 444 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 PSG7Q13046 419 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 SUMF2Q8NBJ7 301 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 OR8G5Q8NG78 346 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 KLF14Q8TD94 323 aaPredicted RBP6.07□□□□□ -1.44
BRCA1-230ENST00000634433 DYRK2Q92630 601 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 TOMM40LQ969M1 308 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 MOB3AQ96BX8 217 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 SFXN3Q9BWM7 321 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 SIRPDQ9H106 197 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 CXXC4Q9H2H0 198 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 TREM2Q9NZC2 230 aa6.07□□□□□ -1.44
BRCA1-230ENST00000634433 ZNF581Q9P0T4 197 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms