RNA–Protein interactions for RNA: ENST00000630543.2

NRXN1-233, Transcript of neurexin 1, human

TSL 5 BASIC

Gene NRXN1, Length 4,500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NRXN1-233	ENST00000630543	GNG13	Q9P2W3	67 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	HSF4	Q9ULV5	492 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	MED13L	Q71F56	2210 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	PQLC2L	A1A4F0	135 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	RRAS	P10301	218 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543		Q3ZCU0	254 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	PRR30	Q53SZ7	412 aa	Predicted RBP	11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	TNFRSF1A	P19438	455 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	UCN	P55089	124 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	HLA-DRB3	P79483	266 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	QRFP	P83859	136 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	TESK1	Q15569	626 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	MSMO1	Q15800	293 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	SNRNP40	Q96DI7	357 aa	Known RBP	11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	IGHG3	P01860	377 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	PPP1CC	P36873	323 aa	Known RBP	11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	SPANXN5	Q5MJ07	72 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	SFXN3	Q9BWM7	321 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	SLC25A31	Q9H0C2	315 aa		11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543	RALY	Q9UKM9	306 aa	Known RBP	11.34	□□□□□ -0.59
NRXN1-233	ENST00000630543		H0Y8G0	127 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	KIAA0141	Q14154	515 aa	Predicted RBP	11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	TBR1	Q16650	682 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	C1QTNF12	Q5T7M4	302 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	RBMXL3	Q8N7X1	1067 aa	Known RBP	11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	CNTNAP3	Q9BZ76	1288 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	ESPL1	Q14674	2120 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	ENSA	O43768	121 aa	Known RBP	11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	ZNF735	P0CB33	412 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	TLE1	Q04724	770 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	SURF2	Q15527	256 aa	Predicted RBP	11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543		Q6ZS92	163 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	ZCCHC24	Q8N2G6	241 aa	Known RBP	11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	BOD1	Q96IK1	185 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	OR1A1	Q9P1Q5	309 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	INTS1	Q8N201	2190 aa	Known RBP	11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543		A0A1W2PPE3	182 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	MED19	A0JLT2	244 aa	Predicted RBP	11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	POLR2G	P62487	172 aa	Known RBP eCLIP	11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	H2BFWT	Q7Z2G1	175 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	HS3ST6	Q96QI5	342 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	SAP30L	Q9HAJ7	183 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	RAB9B	Q9NP90	201 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	CRIM1	Q9NZV1	1036 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543	FBXO7	Q9Y3I1	522 aa		11.33	□□□□□ -0.6
NRXN1-233	ENST00000630543		M0R1X1	148 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	BCL2L11	O43521	198 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	HOXB1	P14653	301 aa	Predicted RBP	11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	G0S2	P27469	103 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	PRDX2	P32119	198 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	SOHLH1	Q5JUK2	328 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	MYPOP	Q86VE0	399 aa	Predicted RBP	11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	TNRC18	O15417	2968 aa	Predicted RBP	11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	TMEM210	A6NLX4	147 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	PRSS44	E7EML9	344 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	GPR137B	O60478	399 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	CFD	P00746	253 aa	Predicted RBP	11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	SPINK9	Q5DT21	86 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	SIGIRR	Q6IA17	410 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	MOB1B	Q7L9L4	216 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	C1orf87	Q8N0U7	546 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	OR52L2P	Q8NGH6	319 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	MALSU1	Q96EH3	234 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	PRELID3B	Q9Y3B1	194 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	MPTX1	A8MV57	137 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	SCAF4	O95104	1147 aa	Known RBP	11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	MDH2	P40926	338 aa	Known RBP	11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	TIMM23B	Q5SRD1	257 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	LRP11	Q86VZ4	500 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	BAP18	Q8IXM2	172 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	FAM89B	Q8N5H3	189 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	SLC35G3	Q8N808	338 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	OR1L1	Q8NH94	360 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	OR10C1	Q96KK4	312 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	LIN7C	Q9NUP9	197 aa	Known RBP	11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	TRGV10	A0A0A0MS01	117 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	CD3E	P07766	207 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	HOXA4	Q00056	320 aa	Predicted RBP	11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	SMUG1	Q53HV7	270 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	PRAMEF5	Q5TYX0	476 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	LIAT1	Q6ZQX7	453 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	LINC01560	Q8TB33	94 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	NUDT16L1	Q9BRJ7	211 aa	Known RBP	11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	PKIB	Q9C010	78 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	FBLN5	Q9UBX5	448 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	WIPI2	Q9Y4P8	454 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	USF3	Q68DE3	2245 aa		11.32	□□□□□ -0.6
NRXN1-233	ENST00000630543	IGHV1-18	A0A0C4DH31	117 aa		11.31	□□□□□ -0.6
NRXN1-233	ENST00000630543		E5RGE8	158 aa		11.31	□□□□□ -0.6
NRXN1-233	ENST00000630543	CYB5R3	P00387	301 aa	Predicted RBP	11.31	□□□□□ -0.6
NRXN1-233	ENST00000630543	OR4A8	P0C604	315 aa		11.31	□□□□□ -0.6
NRXN1-233	ENST00000630543	CCL13	Q99616	98 aa		11.31	□□□□□ -0.6
NRXN1-233	ENST00000630543	NSG2	Q9Y328	171 aa		11.31	□□□□□ -0.6
NRXN1-233	ENST00000630543	OR2W1	Q9Y3N9	320 aa		11.31	□□□□□ -0.6
NRXN1-233	ENST00000630543	WDFY4	Q6ZS81	3184 aa		11.31	□□□□□ -0.6
NRXN1-233	ENST00000630543	PIGBOS1	A0A0B4J2F0	54 aa		11.31	□□□□□ -0.6
NRXN1-233	ENST00000630543	NKX2-6	A6NCS4	301 aa		11.31	□□□□□ -0.6
NRXN1-233	ENST00000630543	IL24	Q13007	206 aa		11.31	□□□□□ -0.6
NRXN1-233	ENST00000630543	IL13RA2	Q14627	380 aa		11.31	□□□□□ -0.6
NRXN1-233	ENST00000630543	MARS2	Q96GW9	593 aa	Known RBP	11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms