RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 LAMB2P55268 1798 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 TMEM218A2RU14 115 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 M0R2Z0 102 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 TSPAN2O60636 221 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 CRISP2P16562 243 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 CD40P25942 277 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 TEPPQ6URK8 271 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 ZNF519Q8TB69 540 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 FAM222BQ8WU58 562 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 RSRP1Q9BUV0 290 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 ANGPTL4Q9BY76 406 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 DCAF16Q9NXF7 216 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 MFNGO00587 321 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 FTH1P19P0C7X4 201 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 GPR6P46095 362 aaPredicted RBP11.14□□□□□ -0.63
SCN8A-209ENST00000627620 UCP2P55851 309 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 FAM214BQ7L5A3 538 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 C9orf62Q8N4C0 152 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 OR51B2Q9Y5P1 312 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 IGHV3-21A0A0B4J1V1 117 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 A0A1W2PPC1 479 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 ZNF79Q15937 498 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 CEACAM21Q3KPI0 293 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 PTX4Q96A99 478 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 A0A0U1RQV5 110 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 ZNF253O75346 499 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 RPL7P18124 248 aaKnown RBP11.14□□□□□ -0.63
SCN8A-209ENST00000627620 CCDC144NLQ6NUI1 221 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 TPRX1Q8N7U7 411 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 BVESQ8NE79 360 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 NUDT16L1Q9BRJ7 211 aaKnown RBP11.14□□□□□ -0.63
SCN8A-209ENST00000627620 NKX2-8O15522 239 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 SRSF10O75494 262 aaKnown RBP11.14□□□□□ -0.63
SCN8A-209ENST00000627620 FCGR3AP08637 254 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 DAOP14920 347 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 DLK1P80370 383 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 SSX8Q7RTT4 187 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 OR4C5Q8NGB2 326 aa11.14□□□□□ -0.63
SCN8A-209ENST00000627620 GSX1Q9H4S2 264 aaPredicted RBP11.14□□□□□ -0.63
SCN8A-209ENST00000627620 C1orf174Q8IYL3 243 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 ISOC2Q96AB3 205 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 CCL13Q99616 98 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 RABAC1Q9UI14 185 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 ADAMTSL1Q8N6G6 1762 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 HELTA6NFD8 242 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 ERGP11308 486 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 RIGQ13278 110 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 KHDC3LQ587J8 217 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 TMEM255AQ5JRV8 349 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 VWA1Q6PCB0 445 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 SLC25A45Q8N413 288 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 PRO1933Q9H354 126 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 DNAJC13O75165 2243 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 RAB29O14966 203 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 STXBP6Q8NFX7 210 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 PDE6DO43924 150 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 CXorf1O96002 111 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 LGALSLQ3ZCW2 172 aaPredicted RBP11.13□□□□□ -0.63
SCN8A-209ENST00000627620 NSUN5P2Q63ZY6 315 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 CBY3A6NI87 242 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 K7N7A8 449 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 WNT5AP41221 380 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 P2RY6Q15077 328 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 KCNMB1Q16558 191 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 HLA-DRB5Q30154 266 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 KRTCAP3Q53RY4 240 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 MRPL54Q6P161 138 aaKnown RBP11.13□□□□□ -0.63
SCN8A-209ENST00000627620 MRGPRGQ86SM5 289 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 WFDC3Q8IUB2 231 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 OR1L6Q8NGR2 347 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 ZNF714Q96N38 554 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 SCN3AQ9NY46 2000 aa11.13□□□□□ -0.63
SCN8A-209ENST00000627620 ADRA2AP08913 450 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 HIST3H3Q16695 136 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 SIGIRRQ6IA17 410 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 EIF4E3Q8N5X7 224 aaKnown RBP11.12□□□□□ -0.63
SCN8A-209ENST00000627620 RAB33BQ9H082 229 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 ARID1AO14497 2285 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 ZNHIT1O43257 154 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 PTBP3O95758 552 aaKnown RBP11.12□□□□□ -0.63
SCN8A-209ENST00000627620 PGA4P0DJD7 388 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 DDA1Q9BW61 102 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 PCM1Q15154 2024 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 B4DEV8 164 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 HPRT1P00492 218 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 CD1AP06126 327 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 LIMS1P48059 325 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 NAAAQ02083 359 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 COX19Q49B96 90 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 ZNF880Q6PDB4 577 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 RBM14Q96PK6 669 aaKnown RBP11.12□□□□□ -0.63
SCN8A-209ENST00000627620 MGST3O14880 152 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 HOXD4P09016 255 aaPredicted RBP11.12□□□□□ -0.63
SCN8A-209ENST00000627620 FGF5P12034 268 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 DYNLRB2Q8TF09 96 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 LOXL4Q96JB6 756 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 OR2V2Q96R30 315 aa11.12□□□□□ -0.63
SCN8A-209ENST00000627620 TPRP12270 2363 aaKnown RBP11.12□□□□□ -0.63
SCN8A-209ENST00000627620 CTXND1A0A1B0GTU2 59 aa11.11□□□□□ -0.63
SCN8A-209ENST00000627620 PRF1P14222 555 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms