RNA–Protein interactions for RNA: ENST00000626660.1

SQSTM1-216, Transcript of sequestosome 1, humanhuman

TSL 5 BASIC

Gene SQSTM1, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-216ENST00000626660 NDUFA13Q9P0J0 144 aa15.59■□□□□ 0.09
SQSTM1-216ENST00000626660 KCNK7Q9Y2U2 307 aa15.59■□□□□ 0.09
SQSTM1-216ENST00000626660 FAM96BQ9Y3D0 163 aa15.59■□□□□ 0.09
SQSTM1-216ENST00000626660 TRAV18A0A075B6X5 111 aa15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 IGHV2-26A0A0B4J1V2 119 aa15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 SMIM31A0A1B0GVY4 71 aa15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 MEIOCA2RUB1 952 aa15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 ZNF701M0R085 212 aaPredicted RBP15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 HBZP02008 142 aa15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 SAA4P35542 130 aa15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 GDNFP39905 211 aa15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 PNLIPRP3Q17RR3 467 aa15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 ZNF880Q6PDB4 577 aa15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 RBMS3Q6XE24 437 aaKnown RBP15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 BCL6BQ8N143 479 aaPredicted RBP15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 ABHD12Q8N2K0 398 aa15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 PRR18Q8N4B5 295 aa15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 OR11H6Q8NGC7 330 aa15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 UBALD1Q8TB05 177 aa15.58■□□□□ 0.08
SQSTM1-216ENST00000626660 F2RL2O00254 374 aa15.57■□□□□ 0.08
SQSTM1-216ENST00000626660 SDCBPO00560 298 aaPredicted RBP15.57■□□□□ 0.08
SQSTM1-216ENST00000626660 TOR1AO14656 332 aa15.57■□□□□ 0.08
SQSTM1-216ENST00000626660 APOA1P02647 267 aa15.57■□□□□ 0.08
SQSTM1-216ENST00000626660 ARG1P05089 322 aa15.57■□□□□ 0.08
SQSTM1-216ENST00000626660 CD34P28906 385 aa15.57■□□□□ 0.08
SQSTM1-216ENST00000626660 GNG2P59768 71 aa15.57■□□□□ 0.08
SQSTM1-216ENST00000626660 PITPNAQ00169 270 aa15.57■□□□□ 0.08
SQSTM1-216ENST00000626660 HACD4Q5VWC8 232 aa15.57■□□□□ 0.08
SQSTM1-216ENST00000626660 PIP4P2Q8N4L2 257 aa15.57■□□□□ 0.08
SQSTM1-216ENST00000626660 OR52M1Q8NGK5 317 aa15.57■□□□□ 0.08
SQSTM1-216ENST00000626660 OR1L1Q8NH94 360 aa15.57■□□□□ 0.08
SQSTM1-216ENST00000626660 A0A087X0M5 115 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 A0A1B0GX30 115 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 FAM172BPA6NC97 362 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 TMEM235A6NFC5 223 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 XRCC3O43542 346 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 HPGDSO60760 199 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 EIF4EP06730 217 aaKnown RBP15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 MNDAP41218 407 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 PRRX1P54821 245 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 HMGN3Q15651 99 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 ZNF260Q3ZCT1 412 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 TMEM69Q5SWH9 247 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 ZNF626Q68DY1 528 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 BAIAP2L2Q6UXY1 529 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 ZNF596Q8TC21 504 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 ZDHHC16Q969W1 377 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 GALMQ96C23 342 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 ZNF286AQ9HBT8 521 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 Q9N2K0 584 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 GNG12Q9UBI6 72 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 TBL2Q9Y4P3 447 aaKnown RBP15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 SVEP1Q4LDE5 3571 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 DNHD1Q96M86 4753 aa15.56■□□□□ 0.08
SQSTM1-216ENST00000626660 FBN3Q75N90 2809 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 A0A0U1RQK1 487 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 ODF3BA8MYP8 253 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 FAM25AB3EWG3 89 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 FAM25CB3EWG5 89 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 FAM25GB3EWG6 89 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 FCGR3AP08637 254 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 FBP1P09467 338 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 HLA-DRB3P79483 266 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 DEFB112Q30KQ8 113 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 IZUMO1Q8IYV9 350 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 SIGLECL1Q8N7X8 197 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 OR9G1Q8NH87 305 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 AUNIPQ9H7T9 357 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 GFOD1Q9NXC2 390 aa15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 SOX21Q9Y651 276 aaPredicted RBP15.55■□□□□ 0.08
SQSTM1-216ENST00000626660 IGHV3-43A0A0B4J1X8 118 aa15.54■□□□□ 0.08
SQSTM1-216ENST00000626660 RGS5O15539 181 aa15.54■□□□□ 0.08
SQSTM1-216ENST00000626660 IGHV3-43DP0DP04 118 aa15.54■□□□□ 0.08
SQSTM1-216ENST00000626660 DTYMKP23919 212 aa15.54■□□□□ 0.08
SQSTM1-216ENST00000626660 KIR2DS4P43632 304 aa15.54■□□□□ 0.08
SQSTM1-216ENST00000626660 KIR2DS1Q14954 304 aa15.54■□□□□ 0.08
SQSTM1-216ENST00000626660 MINOS1Q5TGZ0 78 aa15.54■□□□□ 0.08
SQSTM1-216ENST00000626660 NUDCD2Q8WVJ2 157 aa15.54■□□□□ 0.08
SQSTM1-216ENST00000626660 IL1F10Q8WWZ1 152 aa15.54■□□□□ 0.08
SQSTM1-216ENST00000626660 JMJD8Q96S16 334 aa15.54■□□□□ 0.08
SQSTM1-216ENST00000626660 OR2S2Q9NQN1 319 aa15.54■□□□□ 0.08
SQSTM1-216ENST00000626660 ADAM30Q9UKF2 790 aa15.54■□□□□ 0.08
SQSTM1-216ENST00000626660 ELF5Q9UKW6 265 aaPredicted RBP15.54■□□□□ 0.08
SQSTM1-216ENST00000626660 MINOS1-NBL1R4GNA1 71 aa15.54■□□□□ 0.08
SQSTM1-216ENST00000626660 A0A0A6YYJ9 748 aa15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 TRDCB7Z8K6 153 aa15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 TCF21O43680 179 aa15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 ELK1P19419 428 aa15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 LOXL3P58215 753 aa15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 TAS2R20P59543 309 aa15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 HTD2P86397 168 aa15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 Q3ZCU0 254 aa15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 STEAP3Q658P3 488 aa15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 Q6ZPA2 131 aa15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 DTX3Q8N9I9 347 aa15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 BEND2Q8NDZ0 799 aa15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 LEAP2Q969E1 77 aa15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 CREB3L1Q96BA8 519 aa15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 DGCR14Q96DF8 476 aaKnown RBP15.53■□□□□ 0.08
SQSTM1-216ENST00000626660 MDFIQ99750 246 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms