RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 ZNF816Q0VGE8 651 aaPredicted RBP8.62□□□□□ -1.03
SSBP4-215ENST00000625926 GPR50Q13585 617 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 HNF4GQ14541 408 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 SPHARQ15513 63 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 TMEM30BQ3MIR4 351 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 C6orf183Q5T699 404 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 SAMD5Q5TGI4 173 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 GLT8D1Q68CQ7 371 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 MOB3BQ86TA1 216 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 GAPTQ8N292 157 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 TMEM104Q8NE00 496 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 OR4X2Q8NGF9 303 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 OR4K15Q8NH41 348 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 UBALD1Q8TB05 177 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 TMED9Q9BVK6 235 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 CST11Q9H112 138 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 TPRKBQ9Y3C4 175 aa8.62□□□□□ -1.03
SSBP4-215ENST00000625926 TSSC4Q9Y5U2 329 aaPredicted RBP8.62□□□□□ -1.03
SSBP4-215ENST00000625926 IGHV3-43A0A0B4J1X8 118 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 IGHV1-3A0A0C4DH29 117 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 A0A1W2PRX2 142 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 C12orf77C9JDV5 145 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 FGF16O43320 207 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 SC5DO75845 299 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 UBBP0CG47 229 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 IGHV3-43DP0DP04 118 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 SRMP19623 302 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 VHLP40337 213 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 REG1BP48304 166 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 EBI3Q14213 229 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 INSL4Q14641 139 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 MED22Q15528 200 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 BEAN1Q3B7T3 259 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 TCTEX1D4Q5JR98 221 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 KPRPQ5T749 579 aaPredicted RBP8.61□□□□□ -1.03
SSBP4-215ENST00000625926 TRAT1Q6PIZ9 186 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 CEACAM19Q7Z692 300 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 NRG4Q8WWG1 115 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 PHYHIPQ92561 330 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 FAM46BQ96A09 425 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 Q96M66 194 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 GNG12Q9UBI6 72 aa8.61□□□□□ -1.03
SSBP4-215ENST00000625926 UBE2QL1A1L167 161 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 PDCD6O75340 191 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 MPIG6BO95866 241 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 HBZP02008 142 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 PF4V1P10720 104 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 RCC1P18754 421 aaPredicted RBP8.6□□□□□ -1.03
SSBP4-215ENST00000625926 AQP4P55087 323 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 GP2P55259 537 aaKnown RBP8.6□□□□□ -1.03
SSBP4-215ENST00000625926 HSD17B12Q53GQ0 312 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 OXLD1Q5BKU9 147 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 RBM48Q5RL73 367 aaKnown RBP8.6□□□□□ -1.03
SSBP4-215ENST00000625926 STEAP3Q658P3 488 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 SIGIRRQ6IA17 410 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 FAM53AQ6NSI3 398 aaPredicted RBP8.6□□□□□ -1.03
SSBP4-215ENST00000625926 SLC25A48Q6ZT89 311 aaKnown RBP8.6□□□□□ -1.03
SSBP4-215ENST00000625926 ZNF554Q86TJ5 538 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 LRRTM1Q86UE6 522 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 PRR18Q8N4B5 295 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 C5orf56Q8N8D9 126 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 WFDC9Q8NEX5 89 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 OR2T10Q8NGZ9 312 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 OR1L1Q8NH94 360 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 UFD1Q92890 307 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 ST6GALNAC6Q969X2 333 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 TAF9BQ9HBM6 251 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 KCNIP1Q9NZI2 227 aa8.6□□□□□ -1.03
SSBP4-215ENST00000625926 LSM2Q9Y333 95 aaKnown RBP8.6□□□□□ -1.03
SSBP4-215ENST00000625926 IGHV3-72A0A0B4J1Y9 119 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 PSMB11A5LHX3 300 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 NCBP2LA6PVI3 153 aaKnown RBP8.59□□□□□ -1.03
SSBP4-215ENST00000625926 SERPINE3A8MV23 424 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 TXNL1O43396 289 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 VSIG8P0DPA2 414 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 CD33P20138 364 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 MYF6P23409 242 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 HTR2CP28335 458 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 CD1BP29016 333 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 ZNF134P52741 427 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 SLC35A2P78381 396 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 IRF3Q14653 427 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 CT45A1Q5HYN5 189 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 NKAPLQ5M9Q1 402 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 C1orf100Q5SVJ3 147 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 FAM27D1Q5T7N8 215 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 LIPKQ5VXJ0 399 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 C10orf99Q6UWK7 81 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 REC114Q7Z4M0 266 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 TGIF2LXQ8IUE1 241 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 IZUMO1Q8IYV9 350 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 ZNF439Q8NDP4 499 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 OR10V1Q8NGI7 309 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 CT45A3Q8NHU0 189 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 KCNG3Q8TAE7 436 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 CHPT1Q8WUD6 406 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 RTN4IP1Q8WWV3 396 aaPredicted RBP8.59□□□□□ -1.03
SSBP4-215ENST00000625926 SGCDQ92629 289 aa8.59□□□□□ -1.03
SSBP4-215ENST00000625926 EAF1Q96JC9 268 aaPredicted RBP8.59□□□□□ -1.03
SSBP4-215ENST00000625926 NEDD4LQ96PU5 975 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms