RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 C8orf46Q8TAG6 207 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 DUX5Q96PT3 197 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 DCTN5Q9BTE1 182 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 ZNF747Q9BV97 191 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 NLKQ9UBE8 527 aa10.38□□□□□ -0.75
PNKP-217ENST00000625216 SOX21Q9Y651 276 aaPredicted RBP10.38□□□□□ -0.75
PNKP-217ENST00000625216 IGKV1D-17A0A075B6S4 117 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 A0A1B0GW55 424 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 RFPL4AA6NLU0 287 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 POM121CA8CG34 1229 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 RFPL4AL1F8VTS6 287 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 SLC33A1O00400 549 aaPredicted RBP10.37□□□□□ -0.75
PNKP-217ENST00000625216 DEGS1O15121 323 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 LYRM1O43325 122 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 HOXA3O43365 443 aaPredicted RBP10.37□□□□□ -0.75
PNKP-217ENST00000625216 DUX4L2P0CJ85 424 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 DUX4L3P0CJ86 424 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 DUX4L4P0CJ87 422 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 DUX4L5P0CJ88 424 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 DUX4L6P0CJ89 424 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 DUX4L7P0CJ90 424 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 PSG2P11465 335 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 DEFA1P59665 94 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 DEFA3P59666 94 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 ACTBP60709 375 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 SSBP1Q04837 148 aaKnown RBP10.37□□□□□ -0.75
PNKP-217ENST00000625216 OXA1LQ15070 435 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 FAAP20Q6NZ36 180 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 DUX4L9Q6RFH8 374 aaPredicted RBP10.37□□□□□ -0.75
PNKP-217ENST00000625216 CENPSQ8N2Z9 138 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 CD177Q8N6Q3 437 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 CHPT1Q8WUD6 406 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 MAFIPQ8WZ33 124 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 SNAPC3Q92966 411 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 LHX4Q969G2 390 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 GAFA1Q96PS6 74 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 CMSS1Q9BQ75 279 aaKnown RBP10.37□□□□□ -0.75
PNKP-217ENST00000625216 SPACA1Q9HBV2 294 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 HRASLSQ9HDD0 168 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 DUX4Q9UBX2 424 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 SLC25A10Q9UBX3 287 aaPredicted RBP10.37□□□□□ -0.75
PNKP-217ENST00000625216 ZNF222Q9UK12 451 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 POMT1Q9Y6A1 747 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 DSCAML1Q8TD84 2053 aa10.37□□□□□ -0.75
PNKP-217ENST00000625216 SH2D1BO14796 132 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 PSPNO60542 156 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 PTTG1O95997 202 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 MT-ND4P03905 459 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 FCGR3AP08637 254 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 CSF1P09603 554 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 NAT1P18440 290 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 CBX5P45973 191 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 DYRK1AQ13627 763 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 PAN3Q58A45 887 aaKnown RBP10.36□□□□□ -0.75
PNKP-217ENST00000625216 OR52W1Q6IF63 320 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 SHISA2Q6UWI4 295 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 GDPD3Q7L5L3 318 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 VMO1Q7Z5L0 202 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 TMEM229BQ8NBD8 167 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 OR4S1Q8NGB4 309 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 OR4C16Q8NGL9 310 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 PLPPR1Q8TBJ4 325 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 SSMEM1Q8WWF3 244 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 SDSLQ96GA7 329 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 OCSTAMPQ9BR26 566 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 DPCDQ9BVM2 203 aaPredicted RBP10.36□□□□□ -0.75
PNKP-217ENST00000625216 PPA2Q9H2U2 334 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 IFT46Q9NQC8 304 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 ONECUT1Q9UBC0 465 aa10.36□□□□□ -0.75
PNKP-217ENST00000625216 ZNF230Q9UIE0 474 aaPredicted RBP10.36□□□□□ -0.75
PNKP-217ENST00000625216 IGKV1D-8A0A087WSZ0 117 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 TRBV23-1A0A0A0MS06 115 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 A0A1B0GUS0 222 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 MDFIC2A0A1B0GVS7 189 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 TMEM82A0PJX8 343 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 MCRIP1C9JLW8 97 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 M0R1W7 72 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 CD74P04233 296 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 CD3DP04234 171 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 CRYBA1P05813 215 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 GLAP06280 429 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 GSTT2BP0CG30 244 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 DTYMKP23919 212 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 LMO1P25800 156 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 GABRA2P47869 451 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 TAS2R19P59542 299 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 AP3S2P59780 193 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 RPL15P61313 204 aaKnown RBP10.35□□□□□ -0.75
PNKP-217ENST00000625216 COL10A1Q03692 680 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 RUSC1-AS1Q66K80 236 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 NRARPQ7Z6K4 114 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 HOGA1Q86XE5 327 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 FGFRL1Q8N441 504 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 OR4D10Q8NGI6 311 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 NEK7Q8TDX7 302 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 H1FXQ92522 213 aaKnown RBP10.35□□□□□ -0.75
PNKP-217ENST00000625216 C7orf50Q9BRJ6 194 aaKnown RBP10.35□□□□□ -0.75
PNKP-217ENST00000625216 METTL8Q9H825 291 aaKnown RBP10.35□□□□□ -0.75
PNKP-217ENST00000625216 UNKLQ9H9P5 680 aaKnown RBP10.35□□□□□ -0.75
PNKP-217ENST00000625216 SEBOXQ9HB31 216 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms