RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 TRAPPC1Q9Y5R8 145 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 ZNF814B7Z6K7 855 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 SPINK4O60575 86 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 VDAC1P21796 283 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 EFNA3P52797 238 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 ID3Q02535 119 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 MALLQ13021 153 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 HLA-BQ31612 363 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 ZNF818PQ6ZRF7 136 aa13.07□□□□□ -0.32
PMS1-221ENST00000624204 ERRFI1Q9UJM3 462 aaPredicted RBP13.07□□□□□ -0.32
PMS1-221ENST00000624204 TMEM131Q92545 1883 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 IGHV5-51A0A0C4DH38 117 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 KBTBD11O94819 623 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 KIR2DL1P43626 348 aaPredicted RBP13.06□□□□□ -0.32
PMS1-221ENST00000624204 PAX9P55771 341 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 ZXDAP98168 799 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 COTL1Q14019 142 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 PRAMEF20Q5VT98 475 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 ALKBH2Q6NS38 261 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 MRPL30Q8TCC3 161 aaKnown RBP13.06□□□□□ -0.32
PMS1-221ENST00000624204 ST8SIA1Q92185 356 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 SLC25A22Q9H936 323 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 M0R135 149 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 UBE2G2P60604 165 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 SNAI3Q3KNW1 292 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 SLC22A18ASQ8N1D0 253 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 ZNF799Q96GE5 643 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 SGCZQ96LD1 299 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 R4GN57 208 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 GCH1P30793 250 aa13.06□□□□□ -0.32
PMS1-221ENST00000624204 ZCCHC14Q8WYQ9 949 aaKnown RBP13.06□□□□□ -0.32
PMS1-221ENST00000624204 ANKUB1A6NFN9 424 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 EFNA2O43921 213 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 C17orf67Q0P5P2 114 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 SLC25A47Q6Q0C1 308 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 PLPPR1Q8TBJ4 325 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 VN1R17PQ8TDU5 208 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 FOXJ2Q9P0K8 574 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 IGKV1-27A0A075B6S5 117 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 PGPEP1LA6NFU8 196 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 NPIPB13A6NJU9 1138 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 NPIPB4C9JG80 1138 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 TRAF3IP2O43734 574 aaPredicted RBP13.05□□□□□ -0.32
PMS1-221ENST00000624204 CRYAAP02489 173 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 CRYABP02511 175 aaKnown RBP13.05□□□□□ -0.32
PMS1-221ENST00000624204 KCNIP4Q6PIL6 250 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 TCF23Q7RTU1 214 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 OSR2Q8N2R0 312 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 OR1N1Q8NGS0 311 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 TMEM56Q96MV1 263 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 CCL28Q9NRJ3 127 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 TMEM56-RWDD3S4R434 201 aa13.05□□□□□ -0.32
PMS1-221ENST00000624204 PSMB3P49720 205 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 RTL10Q7L3V2 364 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 WDR5BQ86VZ2 330 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 CISD2Q8N5K1 135 aaKnown RBP13.04□□□□□ -0.32
PMS1-221ENST00000624204 MIEN1Q9BRT3 115 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 RNF24Q9Y225 148 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 SELENOKQ9Y6D0 94 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 GTF3C1Q12789 2109 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 RALGAPA1Q6GYQ0 2036 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 A0A1W2PQF6 199 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 GYPAP02724 150 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 NMSQ5H8A3 153 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 SPANXN5Q5MJ07 72 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 GJC3Q8NFK1 279 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 POC1BQ8TC44 478 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 VAMP8Q9BV40 100 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 ZNF318Q5VUA4 2279 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 CMTM2Q8TAZ6 248 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 MBD3L1Q8WWY6 194 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 PIGCQ92535 297 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 MANBALQ9NQG1 85 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 TAAR3PQ9P1P4 343 aa13.04□□□□□ -0.32
PMS1-221ENST00000624204 COL4A2P08572 1712 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 AHCTF1Q8WYP5 2266 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 IGKV1D-13A0A0B4J2D9 117 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 A0A0G2JRQ6 117 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 UBE2L5PA0A1B0GUS4 154 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 LILRA1O75019 489 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 IGKV1-13P0DP09 117 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 IL3RAP26951 378 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 MSX1P28360 303 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 RAB7AP51149 207 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 SPINK9Q5DT21 86 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 Q6ZPA2 131 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 HLA-CQ95604 372 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 ZNF385AQ96PM9 386 aaKnown RBP13.03□□□□□ -0.32
PMS1-221ENST00000624204 IGKV1-12A0A0C4DH73 117 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 IGKV1D-12P01611 117 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 ARL16Q0P5N6 197 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 A0A0U1RQV5 110 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 TLX3O43711 291 aaPredicted RBP13.03□□□□□ -0.32
PMS1-221ENST00000624204 PDCD6O75340 191 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 RBMXL2O75526 392 aaKnown RBP13.03□□□□□ -0.32
PMS1-221ENST00000624204 TCN2P20062 427 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 PARM1Q6UWI2 310 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 ST6GALNAC3Q8NDV1 305 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 RNF115Q9Y4L5 304 aa13.03□□□□□ -0.32
PMS1-221ENST00000624204 IGKV3D-11A0A0A0MRZ8 115 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms