RNA–Protein interactions for RNA: ENST00000621325.1

LIME1-210, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 2,410 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-210ENST00000621325 TUBD1Q9UJT1 453 aa18.01■□□□□ 0.47
LIME1-210ENST00000621325 CADP27708 2225 aa18.01■□□□□ 0.47
LIME1-210ENST00000621325 SLC33A1O00400 549 aaPredicted RBP18.01■□□□□ 0.47
LIME1-210ENST00000621325 SCGB1D2O95969 90 aa18.01■□□□□ 0.47
LIME1-210ENST00000621325 CEBPDP49716 269 aaPredicted RBP18.01■□□□□ 0.47
LIME1-210ENST00000621325 DEFA6Q01524 100 aa18.01■□□□□ 0.47
LIME1-210ENST00000621325 MEX3BQ6ZN04 569 aaKnown RBP18.01■□□□□ 0.47
LIME1-210ENST00000621325 CCDC71LQ8N9Z2 235 aa18.01■□□□□ 0.47
LIME1-210ENST00000621325 AQP10Q96PS8 301 aa18.01■□□□□ 0.47
LIME1-210ENST00000621325 SLC25A15Q9Y619 301 aa18.01■□□□□ 0.47
LIME1-210ENST00000621325 CEP295Q9C0D2 2601 aa18.01■□□□□ 0.47
LIME1-210ENST00000621325 TRBV6-6A0A0A6YYG2 114 aa18■□□□□ 0.47
LIME1-210ENST00000621325 WNT9BO14905 357 aa18■□□□□ 0.47
LIME1-210ENST00000621325 FOXC1Q12948 553 aa18■□□□□ 0.47
LIME1-210ENST00000621325 ZNF880Q6PDB4 577 aa18■□□□□ 0.47
LIME1-210ENST00000621325 C11orf53Q8IXP5 236 aa18■□□□□ 0.47
LIME1-210ENST00000621325 LRTM2Q8N967 370 aa18■□□□□ 0.47
LIME1-210ENST00000621325 SLC5A7Q9GZV3 580 aa18■□□□□ 0.47
LIME1-210ENST00000621325 CCL28Q9NRJ3 127 aa18■□□□□ 0.47
LIME1-210ENST00000621325 LSM5Q9Y4Y9 91 aaKnown RBP18■□□□□ 0.47
LIME1-210ENST00000621325 C3orf85A0A1B0GTC6 90 aa18■□□□□ 0.47
LIME1-210ENST00000621325 HSD17B6O14756 317 aa18■□□□□ 0.47
LIME1-210ENST00000621325 TIMM8AO60220 97 aaPredicted RBP18■□□□□ 0.47
LIME1-210ENST00000621325 PET100P0DJ07 73 aa18■□□□□ 0.47
LIME1-210ENST00000621325 HABP2Q14520 560 aaPredicted RBP18■□□□□ 0.47
LIME1-210ENST00000621325 C1orf185Q5T7R7 199 aa18■□□□□ 0.47
LIME1-210ENST00000621325 TBC1D26Q86UD7 250 aa18■□□□□ 0.47
LIME1-210ENST00000621325 Q8IYB0 196 aa18■□□□□ 0.47
LIME1-210ENST00000621325 UBALD1Q8TB05 177 aa18■□□□□ 0.47
LIME1-210ENST00000621325 CA5BP1Q8WTZ4 195 aa18■□□□□ 0.47
LIME1-210ENST00000621325 KIRREL1Q96J84 757 aa18■□□□□ 0.47
LIME1-210ENST00000621325 SLC25A32Q9H2D1 315 aa18■□□□□ 0.47
LIME1-210ENST00000621325 EIF2S3LQ2VIR3 472 aaKnown RBP17.99■□□□□ 0.47
LIME1-210ENST00000621325 PRAMEF6Q5VXH4 476 aa17.99■□□□□ 0.47
LIME1-210ENST00000621325 SSX9Q7RTT3 188 aa17.99■□□□□ 0.47
LIME1-210ENST00000621325 LGI3Q8N145 548 aa17.99■□□□□ 0.47
LIME1-210ENST00000621325 RHOFQ9HBH0 211 aa17.99■□□□□ 0.47
LIME1-210ENST00000621325 PPP1R14DQ9NXH3 145 aa17.99■□□□□ 0.47
LIME1-210ENST00000621325 PIEZO2Q9H5I5 2752 aa17.99■□□□□ 0.47
LIME1-210ENST00000621325 C5orf52A6NGY3 159 aa17.99■□□□□ 0.47
LIME1-210ENST00000621325 H7C1Q1 480 aa17.99■□□□□ 0.47
LIME1-210ENST00000621325 HLA-DRB3P79483 266 aa17.99■□□□□ 0.47
LIME1-210ENST00000621325 SLC35G3Q8N808 338 aa17.99■□□□□ 0.47
LIME1-210ENST00000621325 IL1F10Q8WWZ1 152 aa17.99■□□□□ 0.47
LIME1-210ENST00000621325 S100PBPQ96BU1 408 aa17.99■□□□□ 0.47
LIME1-210ENST00000621325 OR14J1Q9UGF5 321 aa17.99■□□□□ 0.47
LIME1-210ENST00000621325 WASF3Q9UPY6 502 aa17.99■□□□□ 0.47
LIME1-210ENST00000621325 CRYABP02511 175 aaKnown RBP17.98■□□□□ 0.47
LIME1-210ENST00000621325 MBPP02686 304 aaPredicted RBP17.98■□□□□ 0.47
LIME1-210ENST00000621325 HKR1P10072 659 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 ZNF83P51522 516 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 MSMPQ1L6U9 139 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 PRR18Q8N4B5 295 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 OR52M1Q8NGK5 317 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 ABHD17AQ96GS6 310 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 RHOVQ96L33 236 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 OR1A1Q9P1Q5 309 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 TMEM210A6NLX4 147 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 UBE2CO00762 179 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 DEDDO75618 318 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 TFF1P04155 84 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 CTXN2P0C2S0 81 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 ZNF146Q15072 292 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 TMEM268Q5VZI3 342 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 DHRS7BQ6IAN0 325 aaPredicted RBP17.98■□□□□ 0.47
LIME1-210ENST00000621325 STOML3Q8TAV4 291 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 PHYHIPLQ96FC7 376 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 DNAJB11Q9UBS4 358 aa17.98■□□□□ 0.47
LIME1-210ENST00000621325 TNFSF12O43508 249 aa17.97■□□□□ 0.47
LIME1-210ENST00000621325 F12P00748 615 aaPredicted RBP17.97■□□□□ 0.47
LIME1-210ENST00000621325 KITLGP21583 273 aa17.97■□□□□ 0.47
LIME1-210ENST00000621325 AKR1C2P52895 323 aa17.97■□□□□ 0.47
LIME1-210ENST00000621325 AKR1C1Q04828 323 aa17.97■□□□□ 0.47
LIME1-210ENST00000621325 ZNF324BQ6AW86 544 aaPredicted RBP17.97■□□□□ 0.47
LIME1-210ENST00000621325 ZNF497Q6ZNH5 498 aa17.97■□□□□ 0.47
LIME1-210ENST00000621325 OR4A4PQ8NGN8 299 aa17.97■□□□□ 0.47
LIME1-210ENST00000621325 A6NLC8 198 aa17.97■□□□□ 0.47
LIME1-210ENST00000621325 MKRN2OSH3BPM6 223 aa17.97■□□□□ 0.47
LIME1-210ENST00000621325 ZNF718Q3SXZ3 478 aa17.97■□□□□ 0.47
LIME1-210ENST00000621325 TMEM222Q9H0R3 208 aa17.97■□□□□ 0.47
LIME1-210ENST00000621325 BARX1Q9HBU1 254 aaPredicted RBP17.97■□□□□ 0.47
LIME1-210ENST00000621325 OR2S2Q9NQN1 319 aa17.97■□□□□ 0.47
LIME1-210ENST00000621325 AMDHD2Q9Y303 409 aa17.97■□□□□ 0.47
LIME1-210ENST00000621325 SH2D1BO14796 132 aa17.96■□□□□ 0.47
LIME1-210ENST00000621325 PSPNO60542 156 aa17.96■□□□□ 0.47
LIME1-210ENST00000621325 ADCYAP1P18509 176 aa17.96■□□□□ 0.47
LIME1-210ENST00000621325 GCH1P30793 250 aa17.96■□□□□ 0.47
LIME1-210ENST00000621325 NAAAQ02083 359 aa17.96■□□□□ 0.47
LIME1-210ENST00000621325 BAP18Q8IXM2 172 aa17.96■□□□□ 0.47
LIME1-210ENST00000621325 OR10J5Q8NHC4 309 aa17.96■□□□□ 0.47
LIME1-210ENST00000621325 CXXC4Q9H2H0 198 aa17.96■□□□□ 0.47
LIME1-210ENST00000621325 HES4Q9HCC6 221 aa17.96■□□□□ 0.47
LIME1-210ENST00000621325 PCDHB10Q9UN67 800 aa17.96■□□□□ 0.47
LIME1-210ENST00000621325 UBE2J1Q9Y385 318 aaPredicted RBP17.96■□□□□ 0.47
LIME1-210ENST00000621325 KIAA2026Q5HYC2 2103 aa17.96■□□□□ 0.47
LIME1-210ENST00000621325 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.96■□□□□ 0.46
LIME1-210ENST00000621325 HAND1O96004 215 aa17.96■□□□□ 0.46
LIME1-210ENST00000621325 TPT1P13693 172 aaKnown RBP17.96■□□□□ 0.46
LIME1-210ENST00000621325 SMCO1Q147U7 214 aa17.96■□□□□ 0.46
LIME1-210ENST00000621325 H1FOOQ8IZA3 346 aaPredicted RBP17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms