RNA–Protein interactions for RNA: ENST00000621266.4

COL4A6-210, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,627 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-210ENST00000621266 BCL2P10415 239 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 ST6GAL1P15907 406 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 KIR2DL1P43626 348 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-210ENST00000621266 KIR2DL2P43627 348 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-210ENST00000621266 GNG3P63215 75 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 PWWP2BQ6NUJ5 590 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 OR4C13Q8NGP0 309 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 APOBEC3DQ96AK3 386 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-210ENST00000621266 RPEQ96AT9 228 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 LINC00615Q96LM1 132 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-210ENST00000621266 TSPAN32Q96QS1 320 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 HOXD4P09016 255 aaPredicted RBP8.7□□□□□ -1.02
COL4A6-210ENST00000621266 SEC11BP0C7V7 166 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 SLC25A1P53007 311 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 IFITM3Q01628 133 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 HFEQ30201 348 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 SNRNP40Q96DI7 357 aaKnown RBP8.7□□□□□ -1.02
COL4A6-210ENST00000621266 LINC00587B1AMM8 73 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 PDCD6O75340 191 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 NDUFB4O95168 129 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 COL9A1P20849 921 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 IFITM2Q01629 132 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 FZD5Q13467 585 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 ZNF345Q14585 488 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 FOXB1Q99853 325 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 CTXND1A0A1B0GTU2 59 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 H0YL77 283 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 TGFAP01135 160 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 IL4P05112 153 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 CEACAM5P06731 702 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 ZNF117Q03924 483 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 SPANXN1Q5VSR9 72 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 NUDT10Q8NFP7 164 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 NUDT11Q96G61 164 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 CCL2P13500 99 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 CTSSP25774 331 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 TGIF1Q15583 401 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 KIAA1644Q3SXP7 199 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 TEX30Q5JUR7 227 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 MVB12AQ96EY5 273 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 TLNRD1Q9H1K6 362 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 SAP30LQ9HAJ7 183 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 GLRX2Q9NS18 164 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 CLDN16Q9Y5I7 305 aa8.7□□□□□ -1.02
COL4A6-210ENST00000621266 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.69□□□□□ -1.02
COL4A6-210ENST00000621266 FRG2CA6NGY1 282 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 H0YIG0 161 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 PITX3O75364 302 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 FOLR2P14207 255 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 CDKN2AP42771 156 aaKnown RBP8.69□□□□□ -1.02
COL4A6-210ENST00000621266 ID4P47928 161 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 SCAND1P57086 179 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 MRGPRFQ96AM1 343 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 OR5AC2Q9NZP5 309 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 PCOLCE2Q9UKZ9 415 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 A0A1B0GWB2 263 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 SNAI2O43623 268 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 HBZP02008 142 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 MGAT2Q10469 447 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 TMEM95Q3KNT9 176 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 LILRA6Q6PI73 481 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 PERPQ96FX8 193 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 C14orf144Q96I85 54 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 FOXC2Q99958 501 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 CCL28Q9NRJ3 127 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 ANXA10Q9UJ72 324 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 FER1L6Q2WGJ9 1857 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 IGHV1OR15-9A0A0B4J2B8 117 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 TMEM50BP56557 158 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 RSPO4Q2I0M5 234 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-210ENST00000621266 ZNF774Q6NX45 483 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 TMEM38BQ9NVV0 291 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 FAM206AQ9NX38 181 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 A0A0B4J2E0 115 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 A0A1B0GX12 115 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 hADV38S2A0JD32 116 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 FAM157AC9JC47 383 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 C1QL1O75973 258 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 CFDP00746 253 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-210ENST00000621266 PRSS2P07478 247 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 MICBQ29980 383 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 ZNF362Q5T0B9 420 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-210ENST00000621266 ZNF770Q6IQ21 691 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-210ENST00000621266 ZNF519Q8TB69 540 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 ZDHHC16Q969W1 377 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 ST6GALNAC6Q969X2 333 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 OR2V2Q96R30 315 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 DMRTA2Q96SC8 542 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 WNT10AQ9GZT5 417 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 CDC42EP3Q9UKI2 254 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 MOSPD3O75425 235 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 GAB4Q2WGN9 574 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 ZNF660Q6AZW8 331 aaPredicted RBP8.69□□□□□ -1.02
COL4A6-210ENST00000621266 OR4C3Q8NH37 302 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 LSM10Q969L4 123 aaKnown RBP8.69□□□□□ -1.02
COL4A6-210ENST00000621266 PGLYRP4Q96LB8 373 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 IP6K3Q96PC2 410 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 ASCL3Q9NQ33 180 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 WIPI2Q9Y4P8 454 aa8.69□□□□□ -1.02
COL4A6-210ENST00000621266 IGHV3-21A0A0B4J1V1 117 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms