RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 FAM27E3Q08E93 113 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 C10orf91Q5T1B1 145 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 PRAMEF6Q5VXH4 476 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 FAM71E2Q8N5Q1 922 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 FAM169BQ8N8A8 192 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 GPHA2Q96T91 129 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 NAA60Q9H7X0 242 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 UQCC1Q9NVA1 299 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 PRELID3BQ9Y3B1 194 aa14.78□□□□□ -0.04
CNOT3-209ENST00000617930 LSM5Q9Y4Y9 91 aaKnown RBP14.78□□□□□ -0.04
CNOT3-209ENST00000617930 COL6A6A6NMZ7 2263 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 TRBV6-6A0A0A6YYG2 114 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 SIRPB1O00241 398 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 SCGB1D2O95969 90 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 ZNF44P15621 663 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 PVALBP20472 110 aaPredicted RBP14.77□□□□□ -0.04
CNOT3-209ENST00000617930 CCKARP32238 428 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 ZNF146Q15072 292 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 MBNL2Q5VZF2 373 aaKnown RBP14.77□□□□□ -0.04
CNOT3-209ENST00000617930 GLYATL2Q8WU03 294 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 GALNT14Q96FL9 552 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 SMIM8Q96KF7 97 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 SFXN3Q9BWM7 321 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 SEC11CQ9BY50 192 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 RHOFQ9HBH0 211 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 HES4Q9HCC6 221 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 AMDHD2Q9Y303 409 aa14.77□□□□□ -0.04
CNOT3-209ENST00000617930 TUSC2O75896 110 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 ABCA11PQ4W5N1 156 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 TIMM23BQ5SRD1 257 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 GGNBP1Q5YKI7 109 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 CBLN2Q8IUK8 224 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 MSI2Q96DH6 328 aaKnown RBP14.76□□□□□ -0.05
CNOT3-209ENST00000617930 BCL2L14Q9BZR8 327 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 TLNRD1Q9H1K6 362 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 SPACA1Q9HBV2 294 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 FAM96BQ9Y3D0 163 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 ADGRG4Q8IZF6 3080 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 A0A1B0GWJ7 208 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 A8MXE2 369 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 DEDDO75618 318 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 SPRNQ5BIV9 151 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 TP53RKQ96S44 253 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 FBXL17Q9UF56 701 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 MLXQ9UH92 298 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 POLDIP2Q9Y2S7 368 aa14.76□□□□□ -0.05
CNOT3-209ENST00000617930 USP24Q9UPU5 2620 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 TIMM8AO60220 97 aaPredicted RBP14.75□□□□□ -0.05
CNOT3-209ENST00000617930 PSPNO60542 156 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 F12P00748 615 aaPredicted RBP14.75□□□□□ -0.05
CNOT3-209ENST00000617930 GLP1RP43220 463 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 CAV2P51636 162 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 ZNF818PQ6ZRF7 136 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 LYZL2Q7Z4W2 148 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 SAV1Q9H4B6 383 aaPredicted RBP14.75□□□□□ -0.05
CNOT3-209ENST00000617930 TMEM210A6NLX4 147 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 M0R1B8 84 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 NXPH2O95156 264 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 GLAP06280 429 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 MUC1P15941 1255 aaPredicted RBP14.75□□□□□ -0.05
CNOT3-209ENST00000617930 LPAR6P43657 344 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 SULT1A2P50226 295 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 EIF2S3LQ2VIR3 472 aaKnown RBP14.75□□□□□ -0.05
CNOT3-209ENST00000617930 HFEQ30201 348 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 ZNF718Q3SXZ3 478 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 DHRS7BQ6IAN0 325 aaPredicted RBP14.75□□□□□ -0.05
CNOT3-209ENST00000617930 WDR82Q6UXN9 313 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 GAPTQ8N292 157 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 UFSP2Q9NUQ7 469 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 KCNIP3Q9Y2W7 256 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 CADP27708 2225 aa14.75□□□□□ -0.05
CNOT3-209ENST00000617930 FBXO24O75426 580 aa14.74□□□□□ -0.05
CNOT3-209ENST00000617930 ACAA1P09110 424 aaPredicted RBP14.74□□□□□ -0.05
CNOT3-209ENST00000617930 NPBWR1P48145 328 aa14.74□□□□□ -0.05
CNOT3-209ENST00000617930 ZNF497Q6ZNH5 498 aa14.74□□□□□ -0.05
CNOT3-209ENST00000617930 Q8IYB0 196 aa14.74□□□□□ -0.05
CNOT3-209ENST00000617930 C18orf12Q96KH6 178 aa14.74□□□□□ -0.05
CNOT3-209ENST00000617930 SMIM3Q9BZL3 60 aa14.74□□□□□ -0.05
CNOT3-209ENST00000617930 CXXC4Q9H2H0 198 aa14.74□□□□□ -0.05
CNOT3-209ENST00000617930 JTBO76095 146 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 TK1P04183 234 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 H2AFB1P0C5Y9 115 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 HERV-K104P61576 105 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 SWI5Q1ZZU3 235 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 TMEM268Q5VZI3 342 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 UBALD1Q8TB05 177 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 SECTM1Q8WVN6 248 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 KIRREL1Q96J84 757 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 RIMS4Q9H426 269 aaPredicted RBP14.73□□□□□ -0.05
CNOT3-209ENST00000617930 OR1A1Q9P1Q5 309 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 KIR2DS1A0A191URI9 304 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 MPPED1O15442 326 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 NDUFA2O43678 99 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 GAPDHP04406 335 aaKnown RBP14.73□□□□□ -0.05
CNOT3-209ENST00000617930 TUBG1P23258 451 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 GCH1P30793 250 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 KIR2DS4P43632 304 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 NKX6-1P78426 367 aaPredicted RBP14.73□□□□□ -0.05
CNOT3-209ENST00000617930 KIR2DS1Q14954 304 aa14.73□□□□□ -0.05
CNOT3-209ENST00000617930 Q6ZRG5 221 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms