RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 GCM1Q9NP62 436 aa6.54□□□□□ -1.36
NEK3-207ENST00000617054 YLPM1P49750 1951 aaKnown RBP6.53□□□□□ -1.36
NEK3-207ENST00000617054 MED13LQ71F56 2210 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 IGLV3-9A0A075B6K5 115 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 CRYM-AS1A6NIL9 109 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 CTSDP07339 412 aaPredicted RBP6.53□□□□□ -1.36
NEK3-207ENST00000617054 PRDX2P32119 198 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 OR3A1P47881 315 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 CASP6P55212 293 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 TAS2R31P59538 309 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 TNFAIP6P98066 277 aaPredicted RBP6.53□□□□□ -1.36
NEK3-207ENST00000617054 FAHD2BQ6P2I3 314 aaPredicted RBP6.53□□□□□ -1.36
NEK3-207ENST00000617054 Q8IYB0 196 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 GALNT11Q8NCW6 608 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 OR10J5Q8NHC4 309 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 LHFPL5Q8TAF8 219 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 MOB3AQ96BX8 217 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 FAHD2AQ96GK7 314 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 COQ2Q96H96 371 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 SCGB3A2Q96PL1 93 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 PRORYQ9H606 182 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 TUBD1Q9UJT1 453 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 ARFGEF3Q5TH69 2177 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 PTAFRP25105 342 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 CEACAM6P40199 344 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 HTR2BP41595 481 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 ERVFRD-1P60508 538 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 GNMTQ14749 295 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 UTF1Q5T230 341 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 OR52L2PQ8NGH6 319 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 CA5BP1Q8WTZ4 195 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 GLYATL2Q8WU03 294 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 SLC5A7Q9GZV3 580 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 PPP1R3CQ9UQK1 317 aa6.53□□□□□ -1.36
NEK3-207ENST00000617054 RBM7Q9Y580 266 aaKnown RBP6.53□□□□□ -1.36
NEK3-207ENST00000617054 H0YIZ8 118 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 OR8U9P0C7N5 309 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 RPA2P15927 270 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 ECI1P42126 302 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 EDDM3BP56851 147 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 SELENOVP59797 346 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 S100A10P60903 97 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 OPCMLQ14982 345 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 KRBOX4Q5JUW0 171 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 CLEC9AQ6UXN8 241 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 GSG1LQ6UXU4 331 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 TBC1D26Q86UD7 250 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 OR8H3Q8N146 312 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 ST6GALNAC3Q8NDV1 305 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 OR10V1Q8NGI7 309 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 OR13A1Q8NGR1 328 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 OR8U1Q8NH10 309 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 OR51H1Q8NH63 302 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 COQ8AQ8NI60 647 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 MFFQ9GZY8 342 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 TLNRD1Q9H1K6 362 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 DECR2Q9NUI1 292 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 MBD2Q9UBB5 411 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 WIPI2Q9Y4P8 454 aa6.52□□□□□ -1.36
NEK3-207ENST00000617054 CELSR2Q9HCU4 2923 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.52□□□□□ -1.37
NEK3-207ENST00000617054 E7EQL1 145 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 DIRAS3O95661 229 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 CD33P20138 364 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 HLA-DRB3P79483 266 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 RAB32Q13637 225 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 IZUMO4Q1ZYL8 232 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 TEX261Q6UWH6 196 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 TMUB2Q71RG4 321 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 LINC00596Q86U02 117 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 ZNF565Q8N9K5 539 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 CCL17Q92583 94 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 NAA60Q9H7X0 242 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 OR5AC2Q9NZP5 309 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 COMMD9Q9P000 198 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 U3KQ87 197 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 KIR2DS1A0A191URI9 304 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 C12orf77C9JDV5 145 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 TEX46H3BTG2 121 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 M0R233 179 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 RGS13O14921 159 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 GYPAP02724 150 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 KIR2DS4P43632 304 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 KIR2DS1Q14954 304 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 IAH1Q2TAA2 248 aaPredicted RBP6.52□□□□□ -1.37
NEK3-207ENST00000617054 SMIM21Q3B7S5 101 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 C11orf87Q6NUJ2 197 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 DMRTC2Q8IXT2 367 aaPredicted RBP6.52□□□□□ -1.37
NEK3-207ENST00000617054 SPERTQ8NA61 448 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 ZNF680Q8NEM1 530 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 RNF126Q9BV68 326 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 SLA2Q9H6Q3 261 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 MAB21L2Q9Y586 359 aa6.52□□□□□ -1.37
NEK3-207ENST00000617054 SRRM5B3KS81 715 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 SHISA9B4DS77 424 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 B8ZZF3 427 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 LYNX1G3V0Z9 82 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 MPPED1O15442 326 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 SPDEFO95238 335 aa6.51□□□□□ -1.37
NEK3-207ENST00000617054 LYNX1P0DP58 116 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms