RNA–Protein interactions for RNA: ENST00000616973.4

NR1H3-235, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1H3, Length 1,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-235ENST00000616973 MSL2Q9HCI7 577 aa13.25□□□□□ -0.29
NR1H3-235ENST00000616973 FZR1Q9UM11 496 aa13.25□□□□□ -0.29
NR1H3-235ENST00000616973 SPEF1Q9Y4P9 236 aa13.25□□□□□ -0.29
NR1H3-235ENST00000616973 SVILO95425 2214 aa13.25□□□□□ -0.29
NR1H3-235ENST00000616973 ASPMQ8IZT6 3477 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 TRAV39A0A0B4J263 110 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 WNT9BO14905 357 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 IGLV2-14P01704 120 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 IGHV3-13P01766 116 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 SLC25A6P12236 298 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 MMP9P14780 707 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 ZNF83P51522 516 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 SMIM21Q3B7S5 101 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 OR10Z1Q8NGY1 313 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 ARL11Q969Q4 196 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 ERGIC1Q969X5 290 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 MUCL1Q96DR8 90 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 COL25A1Q9BXS0 654 aaPredicted RBP13.24□□□□□ -0.29
NR1H3-235ENST00000616973 TOLLIPQ9H0E2 274 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 SEBOXQ9HB31 216 aaPredicted RBP13.24□□□□□ -0.29
NR1H3-235ENST00000616973 KCNIP1Q9NZI2 227 aa13.24□□□□□ -0.29
NR1H3-235ENST00000616973 ZFHX2Q9C0A1 2572 aaPredicted RBP13.24□□□□□ -0.29
NR1H3-235ENST00000616973 HSPA12AO43301 675 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 ADAM20O43506 726 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 PVALBP20472 110 aaPredicted RBP13.23□□□□□ -0.29
NR1H3-235ENST00000616973 CEBPDP49716 269 aaPredicted RBP13.23□□□□□ -0.29
NR1H3-235ENST00000616973 SULT1A2P50226 295 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 PAX5Q02548 391 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 GPHA2Q96T91 129 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 KIAA2026Q5HYC2 2103 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 OOEPA6NGQ2 149 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 M0R1B8 84 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 TNFSF12O43508 249 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 SCO1O75880 301 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 CRYAAP02489 173 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 GLRXP35754 106 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 CFHR2P36980 270 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 NKX6-1P78426 367 aaPredicted RBP13.23□□□□□ -0.29
NR1H3-235ENST00000616973 ID3Q02535 119 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 MST1LQ2TV78 715 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 SUN5Q8TC36 379 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 MMP26Q9NRE1 261 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 LUZP4Q9P127 313 aa13.23□□□□□ -0.29
NR1H3-235ENST00000616973 BORCS7-ASMTA0A0B4J1R7 106 aa13.22□□□□□ -0.29
NR1H3-235ENST00000616973 ZNF705EA8MWA4 302 aaPredicted RBP13.22□□□□□ -0.29
NR1H3-235ENST00000616973 B8ZZF3 427 aa13.22□□□□□ -0.29
NR1H3-235ENST00000616973 CEACAM6P40199 344 aa13.22□□□□□ -0.29
NR1H3-235ENST00000616973 MSMPQ1L6U9 139 aa13.22□□□□□ -0.29
NR1H3-235ENST00000616973 IL34Q6ZMJ4 242 aa13.22□□□□□ -0.29
NR1H3-235ENST00000616973 FAM90A1Q86YD7 464 aa13.22□□□□□ -0.29
NR1H3-235ENST00000616973 OR2C3Q8N628 320 aa13.22□□□□□ -0.29
NR1H3-235ENST00000616973 ABHD17AQ96GS6 310 aa13.22□□□□□ -0.29
NR1H3-235ENST00000616973 SMIM3Q9BZL3 60 aa13.22□□□□□ -0.29
NR1H3-235ENST00000616973 UFSP2Q9NUQ7 469 aa13.22□□□□□ -0.29
NR1H3-235ENST00000616973 A8MXE2 369 aa13.21□□□□□ -0.29
NR1H3-235ENST00000616973 SERPINE2P07093 398 aa13.21□□□□□ -0.29
NR1H3-235ENST00000616973 OR3A1P47881 315 aa13.21□□□□□ -0.29
NR1H3-235ENST00000616973 TDGF1P3P51864 188 aa13.21□□□□□ -0.29
NR1H3-235ENST00000616973 BLOC1S1P78537 153 aa13.21□□□□□ -0.29
NR1H3-235ENST00000616973 PRR18Q8N4B5 295 aa13.21□□□□□ -0.29
NR1H3-235ENST00000616973 ZBTB34Q8NCN2 500 aa13.21□□□□□ -0.29
NR1H3-235ENST00000616973 BPIFCQ8NFQ6 507 aa13.21□□□□□ -0.29
NR1H3-235ENST00000616973 LSM10Q969L4 123 aaKnown RBP13.21□□□□□ -0.29
NR1H3-235ENST00000616973 BSCL2Q96G97 398 aaPredicted RBP13.21□□□□□ -0.29
NR1H3-235ENST00000616973 COQ2Q96H96 371 aa13.21□□□□□ -0.29
NR1H3-235ENST00000616973 GINS3Q9BRX5 216 aa13.21□□□□□ -0.29
NR1H3-235ENST00000616973 WFDC1Q9HC57 220 aa13.21□□□□□ -0.29
NR1H3-235ENST00000616973 ARID1AO14497 2285 aa13.21□□□□□ -0.3
NR1H3-235ENST00000616973 A0A1B0GU03 582 aa13.21□□□□□ -0.3
NR1H3-235ENST00000616973 C12orf77C9JDV5 145 aa13.21□□□□□ -0.3
NR1H3-235ENST00000616973 PITX3O75364 302 aa13.21□□□□□ -0.3
NR1H3-235ENST00000616973 SEC11BP0C7V7 166 aa13.21□□□□□ -0.3
NR1H3-235ENST00000616973 EWSR1Q01844 656 aaKnown RBP eCLIP13.21□□□□□ -0.3
NR1H3-235ENST00000616973 OR2Z1Q8NG97 314 aa13.21□□□□□ -0.3
NR1H3-235ENST00000616973 OR51H1Q8NH63 302 aa13.21□□□□□ -0.3
NR1H3-235ENST00000616973 LRRC29Q8WV35 223 aa13.21□□□□□ -0.3
NR1H3-235ENST00000616973 GALMQ96C23 342 aa13.21□□□□□ -0.3
NR1H3-235ENST00000616973 LURAP1Q96LR2 239 aa13.21□□□□□ -0.3
NR1H3-235ENST00000616973 TP53TG5Q9Y2B4 290 aa13.21□□□□□ -0.3
NR1H3-235ENST00000616973 IGLV3-9A0A075B6K5 115 aa13.2□□□□□ -0.3
NR1H3-235ENST00000616973 ZSCAN5BA6NJL1 495 aa13.2□□□□□ -0.3
NR1H3-235ENST00000616973 SRRM5B3KS81 715 aa13.2□□□□□ -0.3
NR1H3-235ENST00000616973 PSG2P11465 335 aa13.2□□□□□ -0.3
NR1H3-235ENST00000616973 KLF3P57682 345 aaPredicted RBP13.2□□□□□ -0.3
NR1H3-235ENST00000616973 POLR2GP62487 172 aaKnown RBP eCLIP13.2□□□□□ -0.3
NR1H3-235ENST00000616973 COL10A1Q03692 680 aa13.2□□□□□ -0.3
NR1H3-235ENST00000616973 MSMO1Q15800 293 aa13.2□□□□□ -0.3
NR1H3-235ENST00000616973 CXorf66Q5JRM2 361 aaPredicted RBP13.2□□□□□ -0.3
NR1H3-235ENST00000616973 LRP11Q86VZ4 500 aa13.2□□□□□ -0.3
NR1H3-235ENST00000616973 SLC25A31Q9H0C2 315 aa13.2□□□□□ -0.3
NR1H3-235ENST00000616973 PLEKHF2Q9H8W4 249 aa13.2□□□□□ -0.3
NR1H3-235ENST00000616973 PARP11Q9NR21 331 aa13.2□□□□□ -0.3
NR1H3-235ENST00000616973 LYRM2Q9NU23 88 aaPredicted RBP13.2□□□□□ -0.3
NR1H3-235ENST00000616973 LIN7CQ9NUP9 197 aaKnown RBP13.2□□□□□ -0.3
NR1H3-235ENST00000616973 RBM7Q9Y580 266 aaKnown RBP13.2□□□□□ -0.3
NR1H3-235ENST00000616973 LOC400499M0QZD8 3231 aa13.2□□□□□ -0.3
NR1H3-235ENST00000616973 RNF212BA8MTL3 300 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 RPS23P62266 143 aaKnown RBP13.19□□□□□ -0.3
NR1H3-235ENST00000616973 NHLH2Q02577 135 aa13.19□□□□□ -0.3
NR1H3-235ENST00000616973 AESQ08117 197 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms