RNA–Protein interactions for RNA: ENST00000616865.4

UBXN1-218, Transcript of UBX domain protein 1, humanhuman

TSL 5 BASIC

Gene UBXN1, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-218ENST00000616865 A0A1W2PPE2 198 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 A0A1W2PR64 198 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 A0A1W2PRV1 198 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 MEX3AA1L020 520 aaKnown RBP12.16□□□□□ -0.46
UBXN1-218ENST00000616865 FAM181BA6NEQ2 426 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 TMEM235A6NFC5 223 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 C22orf46C9J442 243 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 FCN3O75636 299 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 MT-ND4P03905 459 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 TNFSF8P32971 234 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 SRSF4Q08170 494 aaKnown RBP12.16□□□□□ -0.46
UBXN1-218ENST00000616865 IL18Q14116 193 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 DEFB112Q30KQ8 113 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 ZNF260Q3ZCT1 412 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 SPANXN2Q5MJ10 180 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 C6orf183Q5T699 404 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 HACD4Q5VWC8 232 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 TMEM200BQ69YZ2 307 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 BRD3OSQ6XYD6 125 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 SNX29P2Q8IUI4 249 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 GAL3ST2Q9H3Q3 398 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 AUNIPQ9H7T9 357 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 RAB9BQ9NP90 201 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 RABL2AQ9UBK7 228 aaPredicted RBP12.16□□□□□ -0.46
UBXN1-218ENST00000616865 RABL2BQ9UNT1 228 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 LINC00312Q9Y6C7 94 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 VWFP04275 2813 aa12.16□□□□□ -0.46
UBXN1-218ENST00000616865 DOCK11Q5JSL3 2073 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 KIR2DS1A0A191URI9 304 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 FABP12A6NFH5 140 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 PRSS3P35030 304 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 RAG2P55895 527 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 PAX5Q02548 391 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 TRAT1Q6PIZ9 186 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 FAM131AQ6UXB0 335 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 MOB1BQ7L9L4 216 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 OR6Q1Q8NGQ2 317 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 OR4F5Q8NH21 305 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 C8orf46Q8TAG6 207 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 MRGPRDQ8TDS7 321 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 NUDCD2Q8WVJ2 157 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 ZDHHC16Q969W1 377 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 ZNF714Q96N38 554 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 WDFY2Q96P53 400 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 HDHD3Q9BSH5 251 aaPredicted RBP12.15□□□□□ -0.46
UBXN1-218ENST00000616865 NCOR1P1Q9H4R4 102 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 BEX1Q9HBH7 125 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 IFT46Q9NQC8 304 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.15□□□□□ -0.46
UBXN1-218ENST00000616865 MGAT4AQ9UM21 535 aa12.15□□□□□ -0.46
UBXN1-218ENST00000616865 UBE2J1Q9Y385 318 aaPredicted RBP12.15□□□□□ -0.46
UBXN1-218ENST00000616865 TRAV39A0A0B4J263 110 aa12.14□□□□□ -0.47
UBXN1-218ENST00000616865 ZNF728P0DKX0 622 aa12.14□□□□□ -0.47
UBXN1-218ENST00000616865 GZMHP20718 246 aa12.14□□□□□ -0.47
UBXN1-218ENST00000616865 CBX5P45973 191 aa12.14□□□□□ -0.47
UBXN1-218ENST00000616865 ARF6P62330 175 aa12.14□□□□□ -0.47
UBXN1-218ENST00000616865 METTL11BQ5VVY1 283 aa12.14□□□□□ -0.47
UBXN1-218ENST00000616865 KIR3DL3Q8N743 410 aa12.14□□□□□ -0.47
UBXN1-218ENST00000616865 LY6G5BQ8NDX9 201 aa12.14□□□□□ -0.47
UBXN1-218ENST00000616865 MRPL30Q8TCC3 161 aaKnown RBP12.14□□□□□ -0.47
UBXN1-218ENST00000616865 CITED1Q99966 193 aa12.14□□□□□ -0.47
UBXN1-218ENST00000616865 TAS2R3Q9NYW6 316 aa12.14□□□□□ -0.47
UBXN1-218ENST00000616865 KCNK7Q9Y2U2 307 aa12.14□□□□□ -0.47
UBXN1-218ENST00000616865 ZNF729A6NN14 1252 aaPredicted RBP12.13□□□□□ -0.47
UBXN1-218ENST00000616865 SPINT2O43291 252 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 TPPPO94811 219 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 DTYMKP23919 212 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 BPIFB3P59826 476 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 RELBQ01201 579 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 ZNF273Q14593 569 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 RNASE12Q5GAN4 147 aaKnown RBP12.13□□□□□ -0.47
UBXN1-218ENST00000616865 GPR157Q5UAW9 335 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 PYHIN1Q6K0P9 492 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 PRR18Q8N4B5 295 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 OR13A1Q8NGR1 328 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 CORO2AQ92828 525 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 ARL11Q969Q4 196 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 CYYR1Q96J86 154 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 DMRTB1Q96MA1 342 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 ST6GALNAC5Q9BVH7 336 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 CHIAQ9BZP6 476 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 TNFRSF19Q9NS68 423 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 C1RLQ9NZP8 487 aa12.13□□□□□ -0.47
UBXN1-218ENST00000616865 ELF5Q9UKW6 265 aaPredicted RBP12.13□□□□□ -0.47
UBXN1-218ENST00000616865 M0QZ24 198 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 M0R1W7 72 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 NDUFA7O95182 113 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 NAPSAO96009 420 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 CRYBA1P05813 215 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 MELTFP08582 738 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 FCGR3AP08637 254 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 PTHLHP12272 177 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 CCL3L1P16619 93 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 RCC1P18754 421 aaPredicted RBP12.12□□□□□ -0.47
UBXN1-218ENST00000616865 PYDC2Q56P42 97 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 RUSC1-AS1Q66K80 236 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 Q6YL49 198 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 GAPTQ8N292 157 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 TMEM86BQ8N661 226 aa12.12□□□□□ -0.47
UBXN1-218ENST00000616865 FCAMRQ8WWV6 532 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms