RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 PLPPR5Q32ZL2 321 aa16.46■□□□□ 0.22
SPAST-203ENST00000615843 ZNF600Q6ZNG1 722 aa16.46■□□□□ 0.22
SPAST-203ENST00000615843 SF3B5Q9BWJ5 86 aaKnown RBP16.46■□□□□ 0.22
SPAST-203ENST00000615843 FZR1Q9UM11 496 aa16.46■□□□□ 0.22
SPAST-203ENST00000615843 LINC00587B1AMM8 73 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 FDX2Q6P4F2 183 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 C5orf17Q8NAS9 161 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 TMEM222Q9H0R3 208 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 C5orf66Q9H5L9 145 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 LY75O60449 1722 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 PEBP1P30086 187 aaKnown RBP16.45■□□□□ 0.22
SPAST-203ENST00000615843 ZBTB34Q8NCN2 500 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 TRAV39A0A0B4J263 110 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 LYZP61626 148 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 TGIF1Q15583 401 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 ZNF576Q9H609 170 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 SEBOXQ9HB31 216 aaPredicted RBP16.45■□□□□ 0.22
SPAST-203ENST00000615843 TNFRSF1AP19438 455 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 GLIPR1P48060 266 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 RBM11P57052 281 aaKnown RBP16.45■□□□□ 0.22
SPAST-203ENST00000615843 MRPS11P82912 194 aaKnown RBP16.45■□□□□ 0.22
SPAST-203ENST00000615843 ZNF766Q5HY98 468 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 SLC23A3Q6PIS1 610 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 TEPPQ6URK8 271 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 Q6ZS52 159 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 OR2V2Q96R30 315 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 SH3BGRL3Q9H299 93 aa16.45■□□□□ 0.22
SPAST-203ENST00000615843 MELTFP08582 738 aa16.44■□□□□ 0.22
SPAST-203ENST00000615843 SLC36A1Q7Z2H8 476 aa16.44■□□□□ 0.22
SPAST-203ENST00000615843 OR8A1Q8NGG7 326 aa16.44■□□□□ 0.22
SPAST-203ENST00000615843 OR4C12Q96R67 309 aa16.44■□□□□ 0.22
SPAST-203ENST00000615843 P4HTMQ9NXG6 502 aa16.44■□□□□ 0.22
SPAST-203ENST00000615843 TRGV5A0A0B4J1U4 118 aa16.44■□□□□ 0.22
SPAST-203ENST00000615843 STAG3L2P0CL84 134 aa16.44■□□□□ 0.22
SPAST-203ENST00000615843 GLULP15104 373 aa16.44■□□□□ 0.22
SPAST-203ENST00000615843 MFAP2P55001 183 aa16.44■□□□□ 0.22
SPAST-203ENST00000615843 GMPPAQ96IJ6 420 aaPredicted RBP16.44■□□□□ 0.22
SPAST-203ENST00000615843 OR2H1Q9GZK4 316 aa16.44■□□□□ 0.22
SPAST-203ENST00000615843 CD74P04233 296 aa16.44■□□□□ 0.22
SPAST-203ENST00000615843 NCBP2LA6PVI3 153 aaKnown RBP16.44■□□□□ 0.22
SPAST-203ENST00000615843 EML2O95834 649 aa16.44■□□□□ 0.22
SPAST-203ENST00000615843 ACER2Q5QJU3 275 aa16.44■□□□□ 0.22
SPAST-203ENST00000615843 ARFGEF1Q9Y6D6 1849 aa16.44■□□□□ 0.22
SPAST-203ENST00000615843 GAGE10A6NGK3 116 aa16.43■□□□□ 0.22
SPAST-203ENST00000615843 DXOO77932 396 aaKnown RBP16.43■□□□□ 0.22
SPAST-203ENST00000615843 CXorf66Q5JRM2 361 aaPredicted RBP16.43■□□□□ 0.22
SPAST-203ENST00000615843 SFTPA1Q8IWL2 248 aa16.43■□□□□ 0.22
SPAST-203ENST00000615843 CXXC4Q9H2H0 198 aa16.43■□□□□ 0.22
SPAST-203ENST00000615843 C5orf52A6NGY3 159 aa16.43■□□□□ 0.22
SPAST-203ENST00000615843 FHITP49789 147 aa16.43■□□□□ 0.22
SPAST-203ENST00000615843 SLC35B1P78383 322 aa16.43■□□□□ 0.22
SPAST-203ENST00000615843 ABHD14BQ96IU4 210 aa16.43■□□□□ 0.22
SPAST-203ENST00000615843 MFRPQ9BY79 579 aa16.43■□□□□ 0.22
SPAST-203ENST00000615843 CISD1Q9NZ45 108 aaKnown RBP16.43■□□□□ 0.22
SPAST-203ENST00000615843 KCNMB2Q9Y691 235 aa16.43■□□□□ 0.22
SPAST-203ENST00000615843 COL9A1P20849 921 aa16.43■□□□□ 0.22
SPAST-203ENST00000615843 PMCHL1Q16048 86 aa16.43■□□□□ 0.22
SPAST-203ENST00000615843 CARFQ8N187 725 aa16.43■□□□□ 0.22
SPAST-203ENST00000615843 IL19Q9UHD0 177 aa16.43■□□□□ 0.22
SPAST-203ENST00000615843 RPL7P18124 248 aaKnown RBP16.43■□□□□ 0.22
SPAST-203ENST00000615843 ADAMTS7Q9UKP4 1686 aa16.43■□□□□ 0.22
SPAST-203ENST00000615843 OR2T8A6NH00 312 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 FBLL1A6NHQ2 334 aaKnown RBP16.42■□□□□ 0.22
SPAST-203ENST00000615843 CD1BP29016 333 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 TAS2R60P59551 318 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 EIF4E3Q8N5X7 224 aaKnown RBP16.42■□□□□ 0.22
SPAST-203ENST00000615843 RASL10BQ96S79 203 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 PLA2G2FQ9BZM2 168 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 H0Y980 276 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 J3QT63 122 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 PRRG2O14669 202 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 CDIPTO14735 213 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 LINC01565O15544 149 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 ISG15P05161 165 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 NPY1RP25929 384 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 ZNF137PP52743 207 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 LEMD1Q68G75 181 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 PLA2G3Q9NZ20 509 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 LMX1BO60663 402 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 CA11O75493 328 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 SOD3P08294 240 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 PRF1P14222 555 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 SCGB1D4Q6XE38 83 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 SSX8Q7RTT4 187 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 SRFP11831 508 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 EFNB1P98172 346 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 POC1AQ8NBT0 407 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 GAL3ST2Q9H3Q3 398 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 PSMB2P49721 201 aa16.42■□□□□ 0.22
SPAST-203ENST00000615843 FLYWCH2Q96CP2 140 aaKnown RBP16.42■□□□□ 0.22
SPAST-203ENST00000615843 ADAM11O75078 769 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 PHF7Q9BWX1 381 aaPredicted RBP16.41■□□□□ 0.22
SPAST-203ENST00000615843 RNF122Q9H9V4 155 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 LHX9Q9NQ69 397 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 CA2P00918 260 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 CYB5R2Q6BCY4 276 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 C12orf54Q6X4T0 127 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 LINC00596Q86U02 117 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 OR5A2Q8NGI9 324 aa16.41■□□□□ 0.22
SPAST-203ENST00000615843 MRPL18Q9H0U6 180 aaKnown RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms