RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 ARR3P36575 388 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 HIKESHIQ53FT3 197 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 FADS6Q8N9I5 356 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 MAFAQ8NHW3 353 aaPredicted RBP10.79□□□□□ -0.68
MSH6-213ENST00000614496 PATZ1Q9HBE1 687 aaKnown RBP10.79□□□□□ -0.68
MSH6-213ENST00000614496 OR2W1Q9Y3N9 320 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 C5orf52A6NGY3 159 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 SH2D1BO14796 132 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 PDGFBP01127 241 aaPredicted RBP10.79□□□□□ -0.68
MSH6-213ENST00000614496 H3F3AP84243 136 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 COL19A1Q14993 1142 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 OR8G1Q15617 311 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 IGFBP7Q16270 282 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 TMEM41BQ5BJD5 291 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 NABP1Q96AH0 204 aa10.79□□□□□ -0.68
MSH6-213ENST00000614496 PGLYRP1O75594 196 aaPredicted RBP10.78□□□□□ -0.68
MSH6-213ENST00000614496 SSX2Q16385 188 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 TBC1D28Q2M2D7 210 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 KCNIP4Q6PIL6 250 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 BTNL3Q6UXE8 466 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 LYPD6Q86Y78 171 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 DNASE2BQ8WZ79 361 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 MEGF10Q96KG7 1140 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 OR51I2Q9H344 312 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 CDIPTO14735 213 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 TIMM8AO60220 97 aaPredicted RBP10.78□□□□□ -0.68
MSH6-213ENST00000614496 PGA5P0DJD9 388 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 MAGEA5P43359 124 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 TMEM241Q24JQ0 296 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 GCNT2Q8N0V5 402 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 ZIC4Q8N9L1 334 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 DUSP13Q9UII6 198 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 TCFL5Q9UL49 500 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 ROS1P08922 2347 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 hCG_38984A0A1B0GV85 526 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 LINC01387J3KSC0 135 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 OR3A1P47881 315 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 FABP6P51161 128 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 FOXO1Q12778 655 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 FFAR4Q5NUL3 377 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 SLC23A3Q6PIS1 610 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 VHLLQ6RSH7 139 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 C18orf12Q96KH6 178 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 WDR54Q9H977 334 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 Q9N2K0 584 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 RPRMQ9NS64 109 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 OR1A1Q9P1Q5 309 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 EML5Q05BV3 1969 aa10.78□□□□□ -0.68
MSH6-213ENST00000614496 SRP19P09132 144 aaKnown RBP10.77□□□□□ -0.68
MSH6-213ENST00000614496 FGF12P61328 243 aa10.77□□□□□ -0.68
MSH6-213ENST00000614496 ERVK-16P61578 105 aa10.77□□□□□ -0.68
MSH6-213ENST00000614496 HGFACQ04756 655 aa10.77□□□□□ -0.68
MSH6-213ENST00000614496 KHDC3LQ587J8 217 aa10.77□□□□□ -0.68
MSH6-213ENST00000614496 PACRGQ96M98 296 aaPredicted RBP10.77□□□□□ -0.68
MSH6-213ENST00000614496 OPA3Q9H6K4 179 aa10.77□□□□□ -0.68
MSH6-213ENST00000614496 FZR1Q9UM11 496 aa10.77□□□□□ -0.68
MSH6-213ENST00000614496 CACNA1GO43497 2377 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 LRP5LA4QPB2 252 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 LYL1P12980 280 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 CTSSP25774 331 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 GCH1P30793 250 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 EIF3IQ13347 325 aaKnown RBP10.77□□□□□ -0.69
MSH6-213ENST00000614496 OR1C1Q15619 314 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 Q8WTZ3 238 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 HES7Q9BYE0 225 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 ACTR3CQ9C0K3 210 aaPredicted RBP10.77□□□□□ -0.69
MSH6-213ENST00000614496 OR2D2Q9H210 308 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 POLDIP2Q9Y2S7 368 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 GALR1P47211 349 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 EDDM3BP56851 147 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 LURAP1Q96LR2 239 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 ZNF552Q9H707 407 aaPredicted RBP10.77□□□□□ -0.69
MSH6-213ENST00000614496 ZNF320A2RRD8 509 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 XKRY2A2RUG3 117 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 CEACAM18A8MTB9 384 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 K7N7A8 449 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 BCL2P10415 239 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 MDH2P40926 338 aaKnown RBP10.77□□□□□ -0.69
MSH6-213ENST00000614496 UCP3P55916 312 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 BSXQ3C1V8 233 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 SAP25Q8TEE9 199 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 GLRX2Q9NS18 164 aa10.77□□□□□ -0.69
MSH6-213ENST00000614496 OR5H1A6NKK0 313 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 TRGC1P0CF51 173 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 COX5AP20674 150 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 CT55Q8WUE5 264 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 PRSS50Q9UI38 385 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 TP53TG5Q9Y2B4 290 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 ATP23Q9Y6H3 246 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 EP300Q09472 2414 aaPredicted RBP10.76□□□□□ -0.69
MSH6-213ENST00000614496 A0A087X0M5 115 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 MDFIC2A0A1B0GVS7 189 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 A0A1B0GX30 115 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 PROB1E7EW31 1015 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 C17orf112F2Z3M2 114 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 UBE2CO00762 179 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 G6PCP35575 357 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 PMELP40967 661 aa10.76□□□□□ -0.69
MSH6-213ENST00000614496 CDX1P47902 265 aaPredicted RBP10.76□□□□□ -0.69
MSH6-213ENST00000614496 PRAMEF5Q5TYX0 476 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms