RNA–Protein interactions for RNA: ENST00000614198.4

GGA3-221, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2

Gene GGA3, Length 3,438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-221ENST00000614198 EHFQ9NZC4 300 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 OR14J1Q9UGF5 321 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 STRAPQ9Y3F4 350 aaKnown RBP8.55□□□□□ -1.04
GGA3-221ENST00000614198 R4GMQ9 66 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 TGIF2-C20orf24A0A0A6YYL0 155 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 H3BQ15 152 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 TNFSF12O43508 249 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 IFNA21P01568 189 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 UBE2KP61086 200 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 SUPT4H1P63272 117 aaKnown RBP8.55□□□□□ -1.04
GGA3-221ENST00000614198 RNF151Q2KHN1 245 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 C1orf100Q5SVJ3 147 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 ABHD12BQ7Z5M8 362 aaPredicted RBP8.55□□□□□ -1.04
GGA3-221ENST00000614198 BATF2Q8N1L9 274 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 TOMM40LQ969M1 308 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 SF3B5Q9BWJ5 86 aaKnown RBP8.55□□□□□ -1.04
GGA3-221ENST00000614198 RAB22AQ9UL26 194 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 EPG5Q9HCE0 2579 aa8.55□□□□□ -1.04
GGA3-221ENST00000614198 CYB5BO43169 146 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 CNOT4O95628 575 aaKnown RBP8.54□□□□□ -1.04
GGA3-221ENST00000614198 DIRAS3O95661 229 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 C10orf128Q5T292 105 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 SEM1Q6ZVN7 128 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 MCEMP1Q8IX19 187 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 ZNF100Q8IYN0 542 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 PRR18Q8N4B5 295 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 Q8NA96 180 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 FRZBQ92765 325 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 NICN1Q9BSH3 213 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 SNHG12Q9BXW3 62 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 DKK4Q9UBT3 224 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 C14orf166Q9Y224 244 aaKnown RBP8.54□□□□□ -1.04
GGA3-221ENST00000614198 HRNRQ86YZ3 2850 aaPredicted RBP8.54□□□□□ -1.04
GGA3-221ENST00000614198 CRTAPO75718 401 aaPredicted RBP8.54□□□□□ -1.04
GGA3-221ENST00000614198 ZNF20P17024 532 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 GUCA1AP43080 201 aaPredicted RBP8.54□□□□□ -1.04
GGA3-221ENST00000614198 HAGHQ16775 308 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 SLC16A14Q7RTX9 510 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 THNSL2Q86YJ6 484 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 OR52N4Q8NGI2 321 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 GPR84Q9NQS5 396 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 RALYQ9UKM9 306 aaKnown RBP8.54□□□□□ -1.04
GGA3-221ENST00000614198 RCL1Q9Y2P8 373 aaKnown RBP8.54□□□□□ -1.04
GGA3-221ENST00000614198 USP24Q9UPU5 2620 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 BORCS7-ASMTA0A0B4J1R7 106 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 TGOLN2O43493 480 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 IL18BPO95998 194 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 CELA3BP08861 270 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 OMGP23515 440 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 AARDQ4LEZ3 155 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 TMEM182Q6ZP80 229 aaPredicted RBP8.54□□□□□ -1.04
GGA3-221ENST00000614198 RCC1LQ96I51 464 aaKnown RBP8.54□□□□□ -1.04
GGA3-221ENST00000614198 GINS3Q9BRX5 216 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 CRIM1Q9NZV1 1036 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 PITPNC1Q9UKF7 332 aa8.54□□□□□ -1.04
GGA3-221ENST00000614198 DIDO1Q9BTC0 2240 aaKnown RBP8.53□□□□□ -1.04
GGA3-221ENST00000614198 K7ENP7 123 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 RAD51DO75771 328 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 ZNF205O95201 554 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 MBPP02686 304 aaPredicted RBP8.53□□□□□ -1.04
GGA3-221ENST00000614198 MDKP21741 143 aaPredicted RBP8.53□□□□□ -1.04
GGA3-221ENST00000614198 GAGE1Q13065 139 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 INO80CQ6PI98 192 aaPredicted RBP8.53□□□□□ -1.04
GGA3-221ENST00000614198 CLEC2AQ6UVW9 174 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 Q6ZS92 163 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 APH1AQ96BI3 265 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 SCGB3A2Q96PL1 93 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.53□□□□□ -1.04
GGA3-221ENST00000614198 DLEU1O43261 78 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 TCF21O43680 179 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 MMP7P09237 267 aaPredicted RBP8.53□□□□□ -1.04
GGA3-221ENST00000614198 TUBG1P23258 451 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 APLNRP35414 380 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 GLIPR1P48060 266 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 CHRFAM7AQ494W8 412 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 VAX1Q5SQQ9 334 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 LYPD6Q86Y78 171 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 RTBDNQ9BSG5 229 aaPredicted RBP8.53□□□□□ -1.04
GGA3-221ENST00000614198 RHBDD3Q9Y3P4 386 aa8.53□□□□□ -1.04
GGA3-221ENST00000614198 IGHV3-64DA0A0J9YX35 117 aa8.52□□□□□ -1.04
GGA3-221ENST00000614198 M0R143 59 aa8.52□□□□□ -1.04
GGA3-221ENST00000614198 HSD17B6O14756 317 aa8.52□□□□□ -1.04
GGA3-221ENST00000614198 DEDDO75618 318 aa8.52□□□□□ -1.04
GGA3-221ENST00000614198 AGFG2O95081 481 aa8.52□□□□□ -1.04
GGA3-221ENST00000614198 SP6Q3SY56 376 aa8.52□□□□□ -1.04
GGA3-221ENST00000614198 FAM27BQ5VT28 67 aa8.52□□□□□ -1.04
GGA3-221ENST00000614198 RTL6Q6ICC9 239 aa8.52□□□□□ -1.04
GGA3-221ENST00000614198 VHLLQ6RSH7 139 aa8.52□□□□□ -1.04
GGA3-221ENST00000614198 C17orf78Q8N4C9 275 aa8.52□□□□□ -1.04
GGA3-221ENST00000614198 PLEKHA2Q9HB19 425 aa8.52□□□□□ -1.04
GGA3-221ENST00000614198 IGKV3D-15A0A087WSY6 115 aa8.52□□□□□ -1.05
GGA3-221ENST00000614198 A0A1W2PP11 408 aa8.52□□□□□ -1.05
GGA3-221ENST00000614198 NGFP01138 241 aa8.52□□□□□ -1.05
GGA3-221ENST00000614198 IGHG3P01860 377 aa8.52□□□□□ -1.05
GGA3-221ENST00000614198 LINC00614P0C842 121 aa8.52□□□□□ -1.05
GGA3-221ENST00000614198 FPR2P25090 351 aa8.52□□□□□ -1.05
GGA3-221ENST00000614198 DLK1P80370 383 aa8.52□□□□□ -1.05
GGA3-221ENST00000614198 GLIPR1L1Q6UWM5 242 aa8.52□□□□□ -1.05
GGA3-221ENST00000614198 RARRES2Q99969 163 aa8.52□□□□□ -1.05
GGA3-221ENST00000614198 TMEM208Q9BTX3 173 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms