RNA–Protein interactions for RNA: ENST00000613988.4

CBWD1-223, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-223ENST00000613988 FAM90A13PP0C7W8 464 aa17.72■□□□□ 0.43
CBWD1-223ENST00000613988 FAM90A14PP0C7W9 464 aa17.72■□□□□ 0.43
CBWD1-223ENST00000613988 FAM90A24PP0C7X0 464 aa17.72■□□□□ 0.43
CBWD1-223ENST00000613988 ZNF260Q3ZCT1 412 aa17.72■□□□□ 0.43
CBWD1-223ENST00000613988 NHLRC3Q5JS37 347 aa17.72■□□□□ 0.43
CBWD1-223ENST00000613988 Q8IYB0 196 aa17.72■□□□□ 0.43
CBWD1-223ENST00000613988 CHST4Q8NCG5 386 aa17.72■□□□□ 0.43
CBWD1-223ENST00000613988 OR52I2Q8NH67 350 aa17.72■□□□□ 0.43
CBWD1-223ENST00000613988 RAB3CQ96E17 227 aa17.72■□□□□ 0.43
CBWD1-223ENST00000613988 NICN1Q9BSH3 213 aa17.72■□□□□ 0.43
CBWD1-223ENST00000613988 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.72■□□□□ 0.43
CBWD1-223ENST00000613988 TBC1D24Q9ULP9 559 aa17.72■□□□□ 0.43
CBWD1-223ENST00000613988 FOXI3A8MTJ6 420 aaPredicted RBP17.71■□□□□ 0.43
CBWD1-223ENST00000613988 H3BUI4 141 aa17.71■□□□□ 0.43
CBWD1-223ENST00000613988 SYNGR1O43759 233 aa17.71■□□□□ 0.43
CBWD1-223ENST00000613988 GSTT2BP0CG30 244 aa17.71■□□□□ 0.43
CBWD1-223ENST00000613988 PRDX2P32119 198 aa17.71■□□□□ 0.43
CBWD1-223ENST00000613988 AP3S2P59780 193 aa17.71■□□□□ 0.43
CBWD1-223ENST00000613988 PNLIPRP3Q17RR3 467 aa17.71■□□□□ 0.43
CBWD1-223ENST00000613988 CDNFQ49AH0 187 aa17.71■□□□□ 0.43
CBWD1-223ENST00000613988 MIDNQ504T8 468 aa17.71■□□□□ 0.43
CBWD1-223ENST00000613988 CD177Q8N6Q3 437 aa17.71■□□□□ 0.43
CBWD1-223ENST00000613988 BEND2Q8NDZ0 799 aa17.71■□□□□ 0.43
CBWD1-223ENST00000613988 DEDD2Q8WXF8 326 aa17.71■□□□□ 0.43
CBWD1-223ENST00000613988 SLAMF9Q96A28 289 aa17.71■□□□□ 0.43
CBWD1-223ENST00000613988 C19orf12Q9NSK7 152 aa17.71■□□□□ 0.43
CBWD1-223ENST00000613988 A0A1W2PPH5 198 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 TSPAN9O75954 239 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 LPLP06858 475 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 CD3GP09693 182 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 PGA5P0DJD9 388 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 HIST1H1DP16402 221 aaKnown RBP17.7■□□□□ 0.42
CBWD1-223ENST00000613988 OXA1LQ15070 435 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 ZNF57Q68EA5 555 aaPredicted RBP17.7■□□□□ 0.42
CBWD1-223ENST00000613988 HCP5Q6MZN7 132 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 Q6ZTK2 550 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 ZNF561Q8N587 486 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 GPX8Q8TED1 209 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 C7orf50Q9BRJ6 194 aaKnown RBP17.7■□□□□ 0.42
CBWD1-223ENST00000613988 PPA2Q9H2U2 334 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 TAS2R8Q9NYW2 309 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 MTCH1Q9NZJ7 389 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 MTFP1Q9UDX5 166 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 NOTCH1P46531 2555 aa17.7■□□□□ 0.42
CBWD1-223ENST00000613988 SOCS1O15524 211 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 LANCL1O43813 399 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 ORC5O43913 435 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 NOS1APO75052 506 aaPredicted RBP17.69■□□□□ 0.42
CBWD1-223ENST00000613988 CA11O75493 328 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 RBBP9O75884 186 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 NXPH2O95156 264 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 BCL3P20749 454 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 BLVRBP30043 206 aaPredicted RBP17.69■□□□□ 0.42
CBWD1-223ENST00000613988 GDNFP39905 211 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 TMEM50BP56557 158 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 RBM11P57052 281 aaKnown RBP17.69■□□□□ 0.42
CBWD1-223ENST00000613988 RPL31P62899 125 aaKnown RBP17.69■□□□□ 0.42
CBWD1-223ENST00000613988 DYRK1AQ13627 763 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 TRIM16LQ309B1 348 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 PDLIM3Q53GG5 364 aaPredicted RBP17.69■□□□□ 0.42
CBWD1-223ENST00000613988 MZT2BQ6NZ67 158 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 LINC00596Q86U02 117 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 TOMM5Q8N4H5 51 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 C17orf50Q8WW18 174 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 FAM234AQ9H0X4 552 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 ZNF107Q9UII5 783 aaPredicted RBP17.69■□□□□ 0.42
CBWD1-223ENST00000613988 HSF4Q9ULV5 492 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 ST3GAL6Q9Y274 331 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 TGP01266 2768 aa17.69■□□□□ 0.42
CBWD1-223ENST00000613988 H3BUX3 64 aa17.68■□□□□ 0.42
CBWD1-223ENST00000613988 MFNGO00587 321 aa17.68■□□□□ 0.42
CBWD1-223ENST00000613988 PLA2G10O15496 165 aa17.68■□□□□ 0.42
CBWD1-223ENST00000613988 NPBWR2P48146 333 aa17.68■□□□□ 0.42
CBWD1-223ENST00000613988 CEBPDP49716 269 aaPredicted RBP17.68■□□□□ 0.42
CBWD1-223ENST00000613988 ACTBP60709 375 aa17.68■□□□□ 0.42
CBWD1-223ENST00000613988 TMEM200BQ69YZ2 307 aa17.68■□□□□ 0.42
CBWD1-223ENST00000613988 SLC35E4Q6ICL7 350 aa17.68■□□□□ 0.42
CBWD1-223ENST00000613988 BATF2Q8N1L9 274 aa17.68■□□□□ 0.42
CBWD1-223ENST00000613988 SSX3Q99909 188 aa17.68■□□□□ 0.42
CBWD1-223ENST00000613988 TMEM235A6NFC5 223 aa17.67■□□□□ 0.42
CBWD1-223ENST00000613988 CENPXA8MT69 81 aa17.67■□□□□ 0.42
CBWD1-223ENST00000613988 SERPINE3A8MV23 424 aa17.67■□□□□ 0.42
CBWD1-223ENST00000613988 MPV17LQ2QL34 196 aa17.67■□□□□ 0.42
CBWD1-223ENST00000613988 RNASE12Q5GAN4 147 aaKnown RBP17.67■□□□□ 0.42
CBWD1-223ENST00000613988 PLAC9Q5JTB6 97 aa17.67■□□□□ 0.42
CBWD1-223ENST00000613988 CENPSQ8N2Z9 138 aa17.67■□□□□ 0.42
CBWD1-223ENST00000613988 ARHGAP5-AS1Q96IT6 56 aa17.67■□□□□ 0.42
CBWD1-223ENST00000613988 NRIP2Q9BQI9 281 aa17.67■□□□□ 0.42
CBWD1-223ENST00000613988 HEXA-AS1Q9H8Q6 139 aa17.67■□□□□ 0.42
CBWD1-223ENST00000613988 OR14J1Q9UGF5 321 aa17.67■□□□□ 0.42
CBWD1-223ENST00000613988 hCG_1809904A0A1W2PP81 198 aa17.66■□□□□ 0.42
CBWD1-223ENST00000613988 A0A1W2PPE2 198 aa17.66■□□□□ 0.42
CBWD1-223ENST00000613988 A0A1W2PR64 198 aa17.66■□□□□ 0.42
CBWD1-223ENST00000613988 A0A1W2PRV1 198 aa17.66■□□□□ 0.42
CBWD1-223ENST00000613988 LYRM1O43325 122 aa17.66■□□□□ 0.42
CBWD1-223ENST00000613988 CSF1P09603 554 aa17.66■□□□□ 0.42
CBWD1-223ENST00000613988 PTHLHP12272 177 aa17.66■□□□□ 0.42
CBWD1-223ENST00000613988 GNB3P16520 340 aa17.66■□□□□ 0.42
CBWD1-223ENST00000613988 GABRR1P24046 479 aa17.66■□□□□ 0.42
CBWD1-223ENST00000613988 ERVK11-1P61568 191 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms