RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 NKX2-5P52952 324 aaPredicted RBP7.45□□□□□ -1.22
CCDC47-207ENST00000612558 RAP2BP61225 183 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 HMGN3Q15651 99 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 C2orf68Q2NKX9 166 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 KRBOX4Q5JUW0 171 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 TEX36Q5VZQ5 186 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 LIN54Q6MZP7 749 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 C11orf88Q6PI97 169 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 CLEC18BQ6UXF7 455 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 NLRC3Q7RTR2 1065 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 C5orf24Q7Z6I8 188 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 C1orf87Q8N0U7 546 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 MUC15Q8N387 334 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 ZNF561Q8N587 486 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 CASTOR1Q8WTX7 329 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 ASB13Q8WXK3 278 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 ZNF486Q96H40 463 aaPredicted RBP7.45□□□□□ -1.22
CCDC47-207ENST00000612558 COQ2Q96H96 371 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 KIRREL1Q96J84 757 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 HYLS1Q96M11 299 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 RSRP1Q9BUV0 290 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 FXYD6Q9H0Q3 95 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 RANBP3Q9H6Z4 567 aaPredicted RBP7.45□□□□□ -1.22
CCDC47-207ENST00000612558 TAF9BQ9HBM6 251 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 SHPKQ9UHJ6 478 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 KIF25Q9UIL4 384 aa7.45□□□□□ -1.22
CCDC47-207ENST00000612558 CFAP46Q8IYW2 2715 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 TRAV39A0A0B4J263 110 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 CRYM-AS1A6NIL9 109 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 B8ZZF3 427 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 SMLR1H3BR10 107 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 K7N7A8 449 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 RPS2P15880 293 aaKnown RBP7.44□□□□□ -1.22
CCDC47-207ENST00000612558 HLA-GP17693 338 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 PIGPP57054 158 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 SNRPD2P62316 118 aaKnown RBP7.44□□□□□ -1.22
CCDC47-207ENST00000612558 SUPT4H1P63272 117 aaKnown RBP7.44□□□□□ -1.22
CCDC47-207ENST00000612558 ABCA11PQ4W5N1 156 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 FAM201AQ5SY85 155 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 C6orf183Q5T699 404 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 STUMQ69YW2 141 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 TRAT1Q6PIZ9 186 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 SGPP2Q8IWX5 399 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 H1FOOQ8IZA3 346 aaPredicted RBP7.44□□□□□ -1.22
CCDC47-207ENST00000612558 OR5D13Q8NGL4 314 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 COQ8AQ8NI60 647 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 IL1F10Q8WWZ1 152 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 GALMQ96C23 342 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 SDSLQ96GA7 329 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 LURAP1Q96LR2 239 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 CHIAQ9BZP6 476 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 NCOR1P1Q9H4R4 102 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 PIPOXQ9P0Z9 390 aa7.44□□□□□ -1.22
CCDC47-207ENST00000612558 FBXO9Q9UK97 447 aaPredicted RBP7.44□□□□□ -1.22
CCDC47-207ENST00000612558 TRAV38-1A0A0B4J264 116 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 TEX13DA0A0J9YY54 714 aaPredicted RBP7.43□□□□□ -1.22
CCDC47-207ENST00000612558 DBX1A6NMT0 343 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 TMEM178BH3BS89 294 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 LGALS8O00214 317 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 SIX6O95475 246 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 IFNA2P01563 188 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 HEXAP06865 529 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 GZMHP20718 246 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 GNRHRP30968 328 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 GLIPR1P48060 266 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 H2BFSP57053 126 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 SLC9A3R2Q15599 337 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 KCNJ8Q15842 424 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 ZFYVE26Q68DK2 2539 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 KCTD9Q7L273 389 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 TGIF2LYQ8IUE0 185 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 FAM185AQ8N0U4 392 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 PRR18Q8N4B5 295 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 ZNF565Q8N9K5 539 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 CCDC71LQ8N9Z2 235 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 ZNRF1Q8ND25 227 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 OR5M8Q8NGP6 311 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 OR2T35Q8NGX2 323 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 RTN4IP1Q8WWV3 396 aaPredicted RBP7.43□□□□□ -1.22
CCDC47-207ENST00000612558 CCL17Q92583 94 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 SLC5A7Q9GZV3 580 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 ZNF665Q9H7R5 613 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 SLC2A9Q9NRM0 540 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 TMEM106BQ9NUM4 274 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 OPN4Q9UHM6 478 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 KCNIP3Q9Y2W7 256 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 OR2W1Q9Y3N9 320 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 MAB21L2Q9Y586 359 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 EPG5Q9HCE0 2579 aa7.43□□□□□ -1.22
CCDC47-207ENST00000612558 PPIAL4EA0A075B759 164 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 C12orf77C9JDV5 145 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 PPIAL4DF5H284 164 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 GPR31O00270 319 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 HSPA12AO43301 675 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 RGS11O94810 467 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 HBZP02008 142 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 GYPAP02724 150 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 PPIAL4FP0DN26 164 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 DNASE1P24855 282 aa7.42□□□□□ -1.22
CCDC47-207ENST00000612558 IL2RGP31785 369 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms